Pieris brassicae (large cabbage white): 123711886
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Entry
123711886 CDS
T08632
Name
(RefSeq) high mobility group protein DSP1-like isoform X1
KO
K10802
high mobility group protein B1
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03410
Base excision repair
pbx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123711886
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123711886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbx03036
]
123711886
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123711886
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbx04147
]
123711886
Chromosome and associated proteins [BR:
pbx03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
123711886
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123711886
MMR (mismatch excision repair)
Other MMR factors
123711886
Exosome [BR:
pbx04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123711886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
YABBY
Motif
Other DBs
NCBI-GeneID:
123711886
NCBI-ProteinID:
XP_045520690
LinkDB
All DBs
Position
7:3531556..3545619
Genome browser
AA seq
499 aa
AA seq
DB search
MGDRGATGGAWGARDDASWWSGGAGEIQHQQQINEDIARSTAAATHQLYTYKMTGGFSNP
SGDNPTPNFDYRLINNSNTRDESPQQTWWYASGSVENQQTSSPTSQNQSTSDSEQSNQQA
NGIQQSHQVLQQQQQQAQKDQQSQMQQNQLQQQLEQHQNLQQAIQQAQNLQQSLHQNQQQ
TLQQMLQQQQQQQLQQLQQQQQQQQQQPQQQIKIEQSNNQQNIIQVTQAQAQALVAQAAL
QQQVVQTLQQQQQSLQEHLQAVQQQQIQAALQRQSATLQELQQQAQQQALISQNTPKTRM
PRSKPPNKPRGRMTAYAFFVQSCREEHKKKYPDENVVFAAFSKKCAERWSTMSEKEKMRF
HEMADQDKKRYDLEMKDYVPPKFTKVRGRKRQQPKDPNAPKRSLSAFFWFCNDERSKVKA
NNPEYTMGDIAKELGRRWAAADSDTKTKYESLSETDKARYDREMTAYKKGSLVLGIQPQQ
IMIEPDDEEVEFNGDDEYK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcggggagcgacggggggcgcttggggtgcgcgcgacgatgcctcgtggtgg
tcaggaggcgcaggtgaaatacagcaccaacaacagattaatgaagacatagcaagaagt
actgcggctgctactcaccaattatacacatacaaaatgactggaggcttttcaaaccct
agcggagacaatcccacacctaattttgattatcgattaataaataattcaaatacacga
gatgaatcgccacaacaaacatggtggtacgcttcaggatcagttgaaaatcaacagact
tcatcacctacgtctcaaaatcagtcaacttctgattctgaacaaagtaaccaacaagca
aatggtattcaacaaagccatcaagtattacaacaacagcagcagcaagctcaaaaagat
cagcaaagtcaaatgcaacaaaatcagttacaacaacaattagaacaacaccagaactta
cagcaagctattcagcaggctcaaaatttacaacaatcattacatcagaaccagcaacag
acattgcaacaaatgttgcaacaacagcaacaacaacaattgcaacagctccaacaacag
cagcagcagcaacagcaacaaccacaacagcagataaaaattgaacaaagcaacaatcaa
cagaacataatacaagtgacacaagctcaagcacaggctctggttgcacaagctgcattg
caacagcaagtagtccaaacattgcaacaacagcagcaaagcttacaagaacatttacag
gctgtccaacaacaacaaattcaagctgctttgcaaaggcagtcggcgacactgcaggaa
ttgcagcaacaagcacaacagcaggcgttgatctcacaaaatacacctaaaaccagaatg
ccgcggtcaaaacctccaaacaagccaaggggcagaatgacagcatatgctttctttgta
cagtcatgccgtgaggaacacaagaaaaagtatcctgatgaaaatgttgtgttcgctgca
ttctcaaagaaatgtgctgaaaggtggagtacaatgtcagagaaagagaagatgaggttc
cacgaaatggcggaccaagacaagaagagatacgacttggagatgaaggactacgtaccg
ccgaagtttacgaaagtgcgcgggcgcaagcggcaacaaccgaaagatccaaacgcaccg
aagcgatcgctatctgcgttcttctggttctgcaatgatgaaagatcaaaggtcaaggca
aacaatccagaatacacgatgggtgacatcgcaaaagagctgggccgacgttgggcggca
gccgactccgatactaagacgaagtatgaatccttaagcgagacggacaaggccagatat
gatagggaaatgacagcgtacaaaaaaggttcactggtcttgggtattcagccgcagcag
attatgatcgaaccggatgatgaagaggttgagttcaatggtgatgatgagtacaagtga
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integrated database retrieval system
