Pieris brassicae (large cabbage white): 123712292
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Entry
123712292 CDS
T08632
Name
(RefSeq) transient receptor potential protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
123712292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pbx04040
]
123712292
Ion channels [BR:
pbx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123712292
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
Ank_5
DUF6046
Motif
Other DBs
NCBI-GeneID:
123712292
NCBI-ProteinID:
XP_045521260
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All DBs
Position
7:complement(12720371..12759956)
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AA seq
1175 aa
AA seq
DB search
MNRGSREELLGSSQEALRNSQHDLRNVYERPLTREEKTFLLNADRGDYATVKRLIDEYAS
KPDVLDINCVDPLNRSALIAAIENENIELIRLFLEAGIKVKDALLHAIKEEYVEAVEMLL
QWEEEHHVPGEPYSWESVEPSSATFTTDITPLILAAHRNHYEILKLLLDRGATLPVPHDV
KCGCDECVKSSNEDSLRHSQARINSYRALSSPSLIALSSADPVLTAFELSWELNNLSHME
TEFRVEYKALRQQVQEFATSLLDHTRTSQELEIMLNYNPWELDCWEPGERQTLGRLKLAI
KYKQKMFVAHPNVQQLLGAIWYEGLPGFKRKNIVGQCVQVAKLGAMFPIYCSIYMMSPES
EYGQFMKKPFVKFICHSSSYMLFLSLLSLASQRAEFLVLEYSGISWLQELVEYWKAHERG
SLPGLIEFCVIVYIASLIWGEIRSLWNGGILEYISDLWNMVDFITNMFYIAWICLRFSSW
YIVQRDYKSGKDPWYPRERWDSFDPMLLSEGAFAAGMIFSFLKLVHIFSINPHLGPLQVS
LGRMILDIMKFFFVYMLVLFAFGCGLNQLMWYYAELEKNKCYHLPNGDLPDFDNQERACT
IWRRYANLFETSQSLFWASFGLVDLTCFELTGIKSFTRFWALLTFGSYSVINIIVLLNML
IAMMSNSYQIISERSDIEWKFARSNLWMSYFEDGDTVPPPFNIIPTPKHVSGWINRICNE
RERGSIINKSREKARIQHESVMRVLVRRYVTAEQRARDEVGVTEDDVMEIRQDISTLRFE
LIDILANNGMKTPRINMNETTISGKKGKVMERRILKDFQIGIVEGIIKDVISKESKPKDV
FSQIAKAIVRKGSPENKKKDWNAVVRTNTIRRDPIGSTSEAETKRSRQSLRAHILDNVKD
RTIDPQKLLEFNPKLSDVTPTTRVAYAKFMRSKIKSDFSEREKSGISEKDFSIEDETASG
KVKIKTPPFRVKIPIPVPTVSENLKQNEIKVQAHIEEKGIGGPSSPGGSNQKEGTAAEEP
VEVTKPTTGSPGSEARVEKKEHVIQIENEPESPSKSLYITKEEDSNLQKPITPTPSLHSK
SEKPEQILSAATLEKDHSASRSDSKKYKENAEEAKEDSNEDNPKEDQPKQEKPKEPKPKP
PKLKPAPAPEPASGPKMVTDKGKSKVTGKIVSGWL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcggctccagggaggagcttctcggcagctcccaggaagccctgcggaacagc
cagcatgacctcaggaacgtctacgagcgcccactaacgagagaagagaagacatttcta
cttaatgccgatcggggagactatgcaactgtaaaacggttgatagacgagtatgcatca
aaaccagatgtattggatattaactgcgtagacccactgaacaggtcagcgctcatcgct
gccattgaaaatgaaaacatcgaacttataagacttttcctcgaagctggcatcaaagtt
aaggatgcacttttacatgcgatcaaggaggagtacgtggaggctgtcgagatgctgcta
cagtgggaggaggaacatcatgtgcctggagaaccttatagctgggagtcagtagagcca
tcatcagcgaccttcacaacagacattactcccctgatcctagctgcccatcggaaccac
tatgaaatcctgaaactgctcttggatagaggcgcaacactgccagtgcctcacgacgtc
aagtgcggttgcgacgaatgtgtgaaatcatcgaatgaggattcgctccgtcactcacag
gcccgcattaactcctaccgggctctcagttctccatctcttatcgcattatcctctgct
gatcccgtcctcaccgccttcgaactatcctgggagctgaacaacctcagtcatatggag
acagaatttcgtgtagaatataaggccttaagacaacaagtacaagaatttgccacctca
ttgctggaccacacgcgtacctcacaggaattagaaattatgctgaactataatccttgg
gagttggactgctgggagcctggcgagagacagactttgggcagactcaaactggctatt
aaatataaacagaaaatgttcgtggcacatcctaacgtacaacagctactcggcgctatt
tggtatgaaggtcttccaggttttaaaagaaaaaacattgtcggacaatgtgttcaggtt
gcaaaactcggtgctatgttcccaatatactgttctatatacatgatgtcccccgaatcg
gaatacggtcaatttatgaagaagccattcgtaaaattcatctgtcacagttcatcatac
atgttgtttttatctctattatcgttggcatctcaaagagcggagtttctcgttttggaa
tattcaggaatatcgtggctgcaagagctagtggaatattggaaggctcacgaaagagga
tctctacctggtctaatagaattctgcgtcatcgtctacatagcaagtttaatatggggt
gagatccgttcactctggaacggtggtatattggaatacataagcgacctttggaatatg
gtggacttcatcacgaacatgttttacattgcctggatctgtctgcgtttctcttcgtgg
tacattgtacaacgcgactacaaaagtggcaaggatccatggtaccctcgagagcgttgg
gactctttcgacccgatgctactctccgaaggtgcctttgcagccggcatgatattctcc
ttcctgaaactggtccacatcttctctatcaaccctcatcttggtcccctccaggtttcc
ctcggcagaatgatattggatattatgaagttcttcttcgtttatatgttggtgctgttc
gcttttggatgtggtctgaatcagctgatgtggtactacgcagagttggaaaaaaacaaa
tgctatcatttgccgaatggagatcttcccgacttcgataatcaagaaagggcctgtact
atttggagacgttacgctaatttattcgaaacatctcaatccctcttctgggcgtccttt
ggtctcgtggatctgacctgcttcgagttgactggcataaaaagcttcactcgcttctgg
gcgcttctcacattcggttcctactccgttatcaacatcattgtactactcaacatgctc
atcgctatgatgtcgaactcttatcaaatcatttccgaaagatctgatattgaatggaaa
ttcgctcgcagtaacctctggatgtcgtactttgaagatggagacacggtgcctccacca
tttaacatcatccccacgccgaagcacgtctccgggtggattaatagaatttgtaatgaa
cgggaaaggggctcgattattaacaaatctcgcgaaaaagcaagaatccaacacgaatct
gtgatgcgtgtattggtccgtcggtatgttacggctgaacagcgggcaagagatgaagta
ggtgttactgaagacgatgtgatggagatacgacaggatatatcgacattgcggtttgaa
ttgattgatatacttgcaaataatggcatgaagacaccgagaattaatatgaatgagacc
acaatttccggcaagaaaggtaaagtgatggagaggcgaattctcaaagatttccagatt
ggtatagtggaaggtatcatcaaggatgttatatccaaagagagcaagcctaaagacgtg
tttagtcaaattgctaaggctattgtcagaaagggaagccctgaaaataaaaagaaagat
tggaatgcggtggtccgaacgaatactatacgaagagatccaatcggaagtacctcggaa
gctgaaactaaacgcagcaggcagtcactacgagcgcatattcttgataatgttaaagat
agaacaatcgatccacagaaattgttagagtttaaccctaaactatcggatgtaacgcca
acaacacgagtcgcatacgcgaagttcatgagaagcaagatcaaatcagacttcagcgaa
cgcgagaagagtggcatttcagagaaagacttcagcatcgaagacgaaacggcgtctgga
aaagttaagattaagactccaccatttagagtcaaaataccaataccagtaccaacagtt
tctgagaacctgaaacaaaatgaaattaaagttcaagcacacatcgaagagaaaggaatt
ggtggtccctcaagcccaggtggatccaatcaaaaagagggaacagcagcagaggaacca
gtagaggtaacaaaacctaccacaggctcaccaggctctgaagcaagagtcgaaaagaaa
gaacacgttatccagattgaaaatgaacccgaatcaccatccaaaagcttatatataacc
aaggaagaagactctaatttacaaaaacccatcacacccacaccaagtttgcattcgaaa
tcagaaaaaccagaacaaatcctctcagcggctacgttagaaaaagatcatagtgcatct
agatctgatagcaagaaatataaagaaaacgcagaggaagcaaaggaagactctaatgag
gataatccaaaagaagatcaacctaaacaagaaaagcctaaagagcctaaacctaagcct
cccaaacttaaaccggctcccgcacctgaaccagcatcaggtccaaaaatggtgacagac
aaaggcaaatctaaagtaacgggtaaaattgtttctggctggctgtag
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