Pieris brassicae (large cabbage white): 123712633
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Entry
123712633 CDS
T08632
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx04382
Cornified envelope formation
pbx04512
ECM-receptor interaction
pbx04518
Integrin signaling
pbx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123712633
04518 Integrin signaling
123712633
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123712633
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123712633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbx04147
]
123712633
00536 Glycosaminoglycan binding proteins [BR:
pbx00536
]
123712633
Exosome [BR:
pbx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123712633
Glycosaminoglycan binding proteins [BR:
pbx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123712633
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123712633
NCBI-ProteinID:
XP_045521815
LinkDB
All DBs
Position
7:14086645..14097577
Genome browser
AA seq
1838 aa
AA seq
DB search
MAVRVLWLVTALVPLSGVKTSPQDDPYARGDIEENNINPSRWPPTEYWPTRGLSNRPDLP
PVQPSSPYYQQPTSYPSQPSYPPPPSYSQSQQSYSQSQSTYPRNNFAVYDPVTHQRVPPN
EITRNCTAPGCCVPKCFAEKGNRGFPGHQGSPGMRGLPGHEGAEGPQGPKGQKGQVGPQG
PRGPKGERGKPGAQGFVGLSGPPGPQGDSGAPGIPGRDGCNGTDGDPGIMGSKGSQGPRG
IPGPKGDKGDKGQAAHMGRYPKGQKGEPGADGMQGPQGPVGLSGANGLPGPKGNTGPMGP
LGLRGDKGSKGSKGQSIQGDKGDRGDRGDRGPGCPPAPLVSVDNKGAIKGVKGDSGTKGD
KGEPGRIGEKGDTGLMGEPGLSGQMGIKGEKGIRGNPGERGRDGMFGPSGPMGQKGDQGN
DGLPGLPGRPGSKGEPGRDGQPGLRGLKGIPGPAGGRTGSRGPPGPTGPRGYMGPAGAPG
TDGRPGDRGLSGPMGPPGGQGEPGTPGIEGPAGHKGDKGEPGLDGLQGETGPRGYDGPIG
PTGPRGPKGEDGFSIPGERGNPGVPGLPGERGQKGEHGYQGLRGVPGNSTLGTPGSPGEM
GMPGEKGERGRPGFDGLPGNPGEKGNIGGRCNECWPGGPGQKGDHGSDGIPGERGERGPS
GPVGLTGERGSDGLNGLPGSVGAPGDRGDEGPMGPPGESGADAIIPSNLVKGPPGERGPQ
GEKGLMGPKGDRGIMGPKGDRGLNGMPGFKGDQGRMGTPGIDGISGSDGSPGVPGNKGMS
IKGEKGELGSQGFKGDKGISGRGGLKGEPGQCPNYLQLLTKGEKGNQGAPGPQGPQGMPG
EKGDRGFTGLTGDKGQKGLTGRAGPVGPRGYPGLKGDKGELGSMGFPGTPGDTGSRGFPG
LPGLKGDKGEIGPSMPGPPGPTGFMGKKGDSGPRGIPGTPGKDGPMGPVGLTGEKGDRGF
PGSLGFPGLVGSKGEPGPVGPPGVPGIPGTPGRDGPKGQQGFPGKSGNPGVIGLPGQKGD
RGIQGIEGPKGFPGPRGRPGLKGATGYDGSPGDKGDKGEIGFSGNPGEPGLPGPIGPVGI
EGPKGDQGFQGPPGLPGRTGLTGEKGDRGFPGPLGQKGEPGRAAAKGERGFPGIPGVRGL
DGQPGQDGQKGDKGDIGVSGIGIPGLSGEKGDIGFPGNPGVAGEPGEKGSRGFPGISGPK
GDRGPAGDAGLPGQPGLDGLPGPAGDAGLPGLLGVKGGKGERGFPGRDGIDGQKGDLGPI
GPPGLVGDQGYPGLKGDRGLPGPSLNVKGDKGDIGLPGLNGPTGQKGEPGRDGLQGQQGE
KGDRGFTGERGDYGQTGARGEKGNTGPAGPVGISGRTIKGEKGLPGIPGKHGGRGLPGAT
GEMGERGLPGLPGQTGRPGTPGQPGPQGEKGDQGREGIAGPPGFDGTPGSIGPPGLIGER
GEKGDKGAIGFGAQGEKGNQGVPGLPGLQGERGEKGDRGFDGLNGQQGPIGEVGDKGEIG
FQGSIGVPGMEGVKGDKGDAAIVVYGAKGEPGPRGPPGFNGAPGQDGIPGTRGLDGLPGE
KGDQGFPGPYGPQGPPGIQGLQGFQGERGEVGRTGFPGAPGLPGAPCQNRDYLTGILLVK
HSQTEIVPECEQGHVKLWDGYSLLYIDGNEKAHNQDLGHAGSCVRKFSTMPFLFCNLNDV
CNYASRNDRSYWLSTNNPIPMMPVENNEIKKHISRCVVCEVPANIIAVHSQTLDIPSCPV
GWSSLWIGYSFVMHTGAGGNGGGQALASPGSCLEDFRATPFIECNGEAGTCHHFANELSF
WMTTIEDNKQFDMPERETLKAGRLLQRVSRCAVCIKNT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccgcgtactttggttggtaaccgcgctggtgcccctttcaggagtaaagacg
agtccgcaagatgacccttatgcaaggggagatatcgaagaaaacaatataaatcccagt
cggtggccgccgacggaatactggccaacgagaggattatcgaaccgaccagacttacca
ccggtccaaccctcatctccgtattatcaacaaccaacatcctatccttcccaaccttcc
taccccccaccgccatcctattcacaatcacaacaatcctattcccaatcacaatcaact
tatcctcgtaataactttgccgtttacgatcctgttactcatcaacgagtgccacctaat
gaaattacacggaattgtactgcgcccggatgctgtgttcctaaatgttttgcagaaaaa
ggaaacaggggatttcctggacatcaaggatcaccggggatgagaggtcttccaggacac
gaaggtgctgaaggtccacaaggtccaaaaggacaaaagggtcaagtgggtccacaaggt
ccacgaggccctaagggagaaaggggaaaacctggtgctcaaggttttgttggattatct
ggaccaccagggcctcaaggagactccggagcacccggaatcccaggaagagacggttgt
aatggaaccgatggagatcctggtataatggggtccaaaggatcacaaggacctcgtgga
ataccgggaccgaaaggagacaagggtgacaaaggtcaagctgctcatatggggaggtac
ccgaaagggcaaaaaggagaaccaggggctgatggtatgcaaggacctcaagggccggtt
ggattatctggtgctaatggacttccaggacctaagggaaatacgggacctatgggccca
cttggtctaaggggagataaaggatcgaaagggtcaaaaggccaatcgattcaaggagac
aaaggtgacagaggagataggggtgatagaggtcctgggtgcccaccagcaccattagtt
tctgtcgacaacaaaggcgctattaagggtgtcaaaggagacagtgggactaagggtgat
aaaggggaacctggaagaataggagaaaaaggagataccggtctcatgggtgaaccagga
ttgtcgggacaaatgggtattaaaggagaaaagggtataagagggaatccaggagagaga
ggtcgtgatggtatgttcggtccctcaggcccaatggggcagaaaggtgaccaaggcaac
gacggcttgccgggtcttccaggccggcctggttctaaaggagaacctggaagagatggg
caacctggtttaagagggttaaaaggtattcctgggccagctggtggaaggacaggatct
cgtggcccccctggtcctactggaccaaggggatacatgggacctgcaggtgctccagga
actgacggaaggccgggagacagaggattatcaggccctatgggtcctccagggggacaa
ggtgaaccaggtacacctggtatagaaggacctgctggtcacaaaggtgacaaaggagaa
cccggtctagatggtttacagggtgaaacaggcccaaggggttatgatggccccattgga
cccactggaccacgtggtcctaaaggagaagatggattctcaattcctggcgaaagagga
aatcctggagtaccaggattacctggagaaagaggtcaaaaaggtgaacatggttatcaa
ggcctaagaggtgttccgggaaattctactttaggtacacctggcagcccaggagaaatg
ggaatgccaggtgaaaagggtgaaagaggtcgtccaggctttgacggtttaccgggtaat
cctggtgaaaagggtaatatcggtggacgatgtaatgaatgctggccgggtggtccagga
cagaaaggtgatcatggatctgatggtatacctggagaaaggggtgaaagaggtccttct
ggtccagttggtttgaccggtgaacgaggctctgatggacttaacggattaccaggttca
gttggagctccaggtgatagaggagacgagggccccatggggccaccgggagaaagtgga
gctgatgcaattataccttctaatttagtaaaaggacctccaggagaaagaggtcctcaa
ggagaaaaagggctgatgggaccaaagggcgatagaggaatcatgggacctaaaggggac
cgtggattaaatggaatgccagggtttaagggtgatcagggtagaatgggtacacctggt
attgatggtatatctggaagtgatggatcgccaggagttccaggaaacaaaggaatgtcg
attaaaggagaaaaaggagagcttggatctcaaggattcaaaggtgataaaggtatatca
ggaagaggtggtttaaaaggtgaacctggacagtgtccaaactacttgcaattattgaca
aaaggcgaaaagggcaatcaaggtgcaccaggtcctcagggcccacaaggaatgcctgga
gaaaagggtgacagaggtttcacaggattgacaggagataaaggtcaaaaaggattaact
ggacgtgctggtcctgttggtcctcgaggttacccaggactcaaaggagataaaggggag
ttaggatcgatgggttttcctggtactcctggtgacacagggtcaagaggatttccagga
cttcctggtttaaagggagataaaggtgaaattggaccgtcaatgccaggacctcctgga
ccaaccggatttatgggtaaaaaaggagacagtggaccaaggggtatacctggtacacct
ggtaaggatgggcctatgggaccagtaggtttaacgggtgaaaagggggatagaggtttt
cccggttcccttggatttccgggactagtaggttcaaaaggagaaccaggaccagtcgga
cccccgggagttccgggaataccaggtacaccaggaagagatggaccaaagggtcagcaa
ggttttccaggtaaatcaggaaatccgggcgttattggactacctggtcaaaaaggtgat
agaggcatccaaggaatagaaggtccaaagggattcccaggtccacgaggtcgtccaggc
ttaaagggtgccacgggatacgatggtagtcctggagataaaggtgataagggtgaaata
ggtttttcaggtaatcctggagaaccaggtttgcctggaccaataggacccgttggaata
gaaggaccaaagggagatcaaggtttccaaggtcccccagggctaccaggaagaactgga
cttacgggtgagaaaggcgatagaggtttccccggaccactaggacaaaaaggtgaacca
ggtagagctgctgcaaagggagaaagaggttttccaggtattccaggtgtaagaggatta
gacggacaacctggtcaagatggacaaaaaggagataagggagatattggagtttctgga
atagggattccaggactttcgggagaaaagggtgatataggttttcctggaaaccctgga
gttgctggtgaaccaggtgaaaagggtagtcgcggttttcccggtataagcggtcctaaa
ggagataggggaccagctggagatgcaggtttacctggtcaaccgggattagatggatta
cctggtcctgcgggtgacgctggtctacctggtttactaggtgttaagggaggaaaggga
gaaagaggttttcctggtagggatggaattgatggacaaaaaggagatctaggaccgatc
ggaccaccaggcttagtaggagaccaaggatatcctggtctaaagggagacaggggactt
cccggaccatcacttaacgtaaaaggagacaaaggagatatagggctcccgggactaaat
ggtccaactggccagaaaggtgaacctgggcgagatggactgcaaggtcaacaaggtgaa
aagggagaccgaggattcactggtgaaagaggagattatgggcaaactggtgccagaggt
gaaaaaggtaacactggaccagctggaccagttggcatatctggccgaactattaaagga
gaaaaaggcttgccaggaattccaggtaaacatggtgggcgtggcttgccaggtgcaacc
ggagaaatgggagagcgaggattacccggattaccgggtcaaacaggacgccctggaacg
ccaggacaacctggcccacaaggagagaaaggagatcaaggtcgtgaaggtattgcaggg
ccaccaggatttgatggaactcctggttcaattggtcctccaggtctcatcggtgaaagg
ggagaaaagggagacaaaggtgcgattggatttggtgcacaaggagaaaaaggaaaccaa
ggagttcctggtctacctggcttacaaggagaaagaggcgaaaaaggagatcgagggttt
gacgggttaaatggtcaacaaggaccaataggagaagtaggtgataaaggtgaaataggt
ttccaaggtagcataggtgtaccaggcatggaaggtgtcaagggtgacaaaggtgatgca
gctatagttgtatatggagcaaagggagaacctggccctaggggaccacctggctttaac
ggtgctcctggtcaggatggtattcctggaacaagaggattggacggtctaccaggtgaa
aaaggagatcaaggtttcccaggcccttacggcccacaaggccctcctggaatacaagga
ttacaagggttccaaggtgaaagaggtgaagtaggtcgcactggattcccgggtgcacca
ggacttcctggcgcgccttgtcaaaatagagattatcttacgggaattcttttagtaaaa
catagtcaaactgaaatagtgccagaatgtgaacagggtcacgtgaagctatgggatgga
tattctctactctatattgatggaaacgaaaaagcacacaatcaagatttgggccacgcc
ggttcctgcgtccgcaaattcagtacaatgccattcctattctgtaatctcaatgacgtg
tgtaattatgcaagtagaaacgatcggagctactggctatcaactaacaaccccatacct
atgatgccagtagaaaataatgaaataaagaaacatatatcaagatgtgtcgtatgcgaa
gttcccgctaatattatagcagttcacagtcaaacacttgatatacccagttgcccggtt
ggatggagttctctgtggataggatacagtttcgttatgcatactggagcgggaggtaat
ggaggtggacaagcacttgcaagtccggggtcatgtcttgaagacttccgagccacacca
ttcatagaatgtaacggtgaggcaggcacttgccatcacttcgccaatgaactcagtttt
tggatgacaactatcgaagacaataaacagttcgacatgcccgaacgagagaccttaaaa
gcaggtcgtttacttcaacgagtttctagatgcgcagtttgtattaaaaacacgtag
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integrated database retrieval system
