Pieris brassicae (large cabbage white): 123712837
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Entry
123712837 CDS
T08632
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pbx
Pieris brassicae (large cabbage white)
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123712837
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
123712837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_12
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_11
TPR_16
TPR_17
TPR_10
TPR_6
ARM_TT21_5th
TPR_7
TPR_9
TPR_Slam
ANAPC3
ARM_TT21_4th
SNAP
Coatomer_E
DUF6584
Motif
Other DBs
NCBI-GeneID:
123712837
NCBI-ProteinID:
XP_045522083
LinkDB
All DBs
Position
8:17418646..17434391
Genome browser
AA seq
1209 aa
AA seq
DB search
MSLEIPLMSTDEVIELDPELLPSGNEVLGILQQERSQLNVWINVALAYYKQKKIDDFLKI
LEASRVDANIDYRDFERDQMRALDMLAAYYVQEANKEKSKDKKKDLFTKATLLYTMADKI
IMYDQNHLLGRAYFCLLEGDKMGQADTQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGAL
AFYKKALRTNPNSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVGLSILKL
NQHESESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTENEA
MRAESCHHLARAFHAQGDCDQAFQYYYQATQFAPPNFVLPHYGLGQMYIYRGDTENAAQC
FEKVLKAQPGNYETMKILGSLYANSPSQLQRDIARQHLKKVTEQFPDDVEAWIELAQILE
QNDLQGSLNAYSTAMKILKDKVNADIPAEILNNVAALHYRLGNLTDAMKYLEEALEREKA
DAETLDAQYYNSIAVTTMYNLARLNEALCMYNKAEKLYKDILKEHPNYIDCYLRLGCMAR
GKGQIYEASDWFKEALKVNLEHADSWSLLGNLHLGQQEWGPGQKKFERILQNASTSSDAY
SLIALGNVWLQTLHQPGQEKDREKRHQERALTMYKQVLKNDPKNIWAANGIGCVLAQKGC
VNEARDIFAQVREATADFPDVWMNIAHIYVEQKQYINAIQMYENCIRKFRKQHDVEWLTW
LARAQTLAGRSRAARSTLLRARRVAPHDGALLFNTALALRRLAAHVLKDERSELKVVLRA
VHELHVSHRYFQRLSTVEGAERARYEPAAAAAEARACADLLSQAQWHVARARRQHEEEVT
LRDRQREQREAFRRQQEDDRKRREEEQAKSTVEMLQKRQEYKEKTKNALLFADMPLEGKS
KGRGRRRDEYISDSGSGSDRPREEGREPKQRKRKREGGEGKKRGRKARDKRGSGSDSDPP
RKKGKKRGEKGIGRREKAKMAEDKLGSKQRAKIVSKETISTSESDSDTSRKSRSRSRSRS
GSRSPPANKGRKRIMSASDSDRSRSKSRSKSRSRSGSAKSRSRSKSRSRSKSGSRSRSRS
KSRNRSKSRGRSKSRGRSKSRGSSKSRSRSKSGSRSKSRSRSKSRSRSKSRSRSKSRSRS
KSRSRSKSRSKSRSRSKSRSRSRSKSRSKSRSKSGSRSRSGSRSRSGSRNSRPDTPESRK
SVSASEDEA
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagagataccattaatgagcaccgatgaggtgatagaacttgatccggagcta
ttgccatcgggtaatgaagttcttggtatcttacaacaagaacggtcccaacttaatgtt
tggataaatgttgcactggcttattataaacaaaaaaagatcgatgatttccttaaaatc
ttggaggcgtcccgtgtggacgccaacattgactatagagactttgagagagaccagatg
cgagctttggatatgcttgcagcttattatgttcaagaagcaaataaagaaaaatcaaag
gacaagaaaaaagatctctttactaaagcaaccttactttatacaatggcagataaaatt
attatgtatgaccagaaccatctccttggccgtgcttatttttgtcttcttgagggtgat
aaaatgggacaagctgatacccagtttaattttgttctcaatcaatctcctaacaatgtt
ccttcactacttggaaaagcatgtattgccttcaaccgaaaagattatagaggggcctta
gcattctataaaaaagcattgagaacaaatcctaatagtccagcagcactacgtcttgga
atgggccattgttttatgaaacttaacaatcaagaaaaagctagaatggcatttgaaaga
gctttgcagctcgatcctcaatgtgtgggagcacttgttggtctctctatattgaaatta
aatcaacatgagagtgaatcaaataaaatggcagttataatgctttctaaggcttatgcc
attgatcctaagaaccctatggttcttaatcacttggcaaatcatttctttttcaaaaag
gattatggtaaagttcaacatctggcattacatgctttccataatacggaaaacgaagct
atgagggcagagagttgccatcacttagcaagagcttttcacgcacaaggagactgtgat
caggccttccagtattattatcaggcaacacagtttgccccacctaattttgtattgcca
cactacgggctagggcaaatgtatatttatagaggagatactgaaaatgcagcacaatgc
tttgaaaaagtactgaaagcacaaccaggtaactatgaaactatgaagatcttgggttcc
ctatatgccaactccccttcacaacttcaacgggatattgccagacaacatttaaagaag
gtgacagaacagttccctgatgatgtcgaagcttggatcgaattggcacaaatattggaa
caaaatgatttacagggctccttaaacgcatacagtacagcgatgaaaattttaaaagac
aaagtgaatgctgacatcccagctgagattctgaacaatgttgccgcactgcattatcgt
cttggaaacttgactgacgcaatgaaatacttagaagaagccttggaaagggaaaaagcg
gacgcagaaacgctggatgcgcaatactacaactccattgctgtgactactatgtacaac
ttggcacgcctcaatgaagcactctgcatgtacaacaaggcagagaagttgtacaaggat
atacttaaggaacatcctaactacattgattgctatcttaggttgggttgtatggcgcgc
ggcaagggtcagatctacgaagcatctgactggttcaaagaggctttgaaggtgaatctg
gagcacgctgattcctggtctctgctgggaaacttgcatttaggacaacaggaatgggga
cctgggcagaagaaatttgaaaggattctgcaaaatgcctccacttctagtgatgcatat
tcactaatcgctctcggcaatgtttggctgcaaactctacaccaaccgggtcaagagaaa
gatcgcgaaaagcgtcaccaagaaagggcgctaactatgtacaaacaggtgttgaagaac
gatcctaagaacatttgggcggcaaatggaattggatgcgtactggcacagaagggttgc
gtgaacgaagccagggacatattcgcacaagtccgcgaagctacggcagatttccctgat
gtctggatgaatattgcacacatttatgtcgaacagaaacaatatatcaacgccatacaa
atgtacgaaaactgcattcgcaaattccgcaaacaacacgacgtggaatggttgacttgg
ctagcacgagctcaaactctcgcgggacgttcgagagccgcgcgatcgactttactcagg
gcgaggcgagtggcgccacacgacggggccttgttgttcaacacggcgttggccttgcgg
agattggctgcccacgtgctcaaggacgagaggtcggagttgaaggtcgtgctacgtgcg
gttcacgagttgcacgtgtcccacaggtacttccaacgcctatccacagtggagggcgct
gaaagagcccgctatgagccagctgctgctgcagccgaggctcgggcctgcgctgacctt
ctctcacaggcgcagtggcatgtggcaagggcaaggaggcaacacgaggaagaggtcact
cttagggaccgccagagggagcaaagagaagccttccggaggcaacaggaagacgatcgc
aaacgtcgcgaagaagaacaagcgaagagtacagtggagatgttgcagaagaggcaagag
tacaaagagaagacaaagaacgctctgctctttgcagatatgccgcttgagggcaagtct
aagggaagaggacgaagacgagacgaatacatttcggattcgggcagtggaagtgatcgg
ccgagggaggaaggccgcgaaccgaagcaacgtaaacgcaaacgtgaaggaggcgaaggc
aagaaacgcggtcgtaaagctcgcgacaaacgcggcagcggcagcgacagtgatcctccg
aggaagaagggaaagaaacggggagaaaaaggtatcggtcgccgcgaaaaagccaaaatg
gctgaagacaagcttggctccaaacaaagggctaagatcgtttcgaaagagactatttct
acgtcagaatcggactcggacaccagtcgcaagtcgcgcagtcgcagtcgtagtcgcagc
ggcagtcgcagcccacccgctaataagggccggaagagaatcatgtcggcatctgatagt
gacagatctcgctcaaagagccgatcgaagtctaggagtcgctcagggtctgctaaaagc
cgctcaagatctaagagtcggtcaagatctaaaagtggatctagatccaggtctaggtct
aaatctaggaacagatccaaatccagaggtcgctccaagtccagaggtcgctccaagtcc
agaggtagctcaaagtccagaagtcgctccaagtccggaagccgctccaagtctagaagt
cgttccaagtctaggagtcgctctaagtctaggagtcggtccaagtccagaagtcgttcg
aaatcaagaagcaggtctaagtccagaagcaaatcgaggtctaggtctaagagccgttct
cggtctagatccaagagccgttctaaatctaggtctaaaagcggatcacgaagtcgttct
ggatcccgttcgcggtctggatccaggaactctagacccgacacacccgagtccagaaaa
tctgtgtcggcaagtgaagatgaagcctag
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integrated database retrieval system
