Pieris brassicae (large cabbage white): 123713001
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Entry
123713001 CDS
T08632
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03018
RNA degradation
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123713001
09123 Folding, sorting and degradation
03018 RNA degradation
123713001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123713001
03041 Spliceosome [BR:
pbx03041
]
123713001
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123713001
mRNA degradation factors
5'-3' decay
Lsm complex
123713001
Spliceosome [BR:
pbx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123713001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123713001
NCBI-ProteinID:
XP_045522410
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All DBs
Position
8:3694617..3695538
Genome browser
AA seq
117 aa
AA seq
DB search
MASKDGNEKTKGPQGAGDNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLL
NLVLDNTTEYLRDPDDPYKLLDDTRALGLVVCRGTSVVLICPMEGMEAIPNPFIAQE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaaggatggcaatgaaaagactaagggtccacaaggtgctggagataataag
gagaagcgtcgaaaagagtctattttagacttaagtaaatatttagagaagagcattagg
gttaaatttgctgggggaagagaagcagctggaatcttgaaaggctatgatccattattg
aacctagtgttagacaatactacagaatacttaagagatcctgatgacccctacaaatta
cttgatgataccagagcactaggacttgtggtgtgtcgtggtacatctgttgttttaata
tgtcctatggaaggcatggaggcaatacccaatcctttcatagctcaggagtaa
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