Pieris brassicae (large cabbage white): 123713345
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Entry
123713345 CDS
T08632
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pbx
Pieris brassicae (large cabbage white)
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbx03009
]
123713345
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123713345
Ribosome biogenesis [BR:
pbx03009
]
Eukaryotic type
Pre-60S particles
Helicases
123713345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
SBF_like
Motif
Other DBs
NCBI-GeneID:
123713345
NCBI-ProteinID:
XP_045522910
EnsemblRapid:
ENSPBSG00000012467
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All DBs
Position
8:complement(12810736..12814770)
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AA seq
599 aa
AA seq
DB search
MVNKAWNKVTPTLSIPVLNCITKQGFNVMTPIQAAVIPLLLSCKDVVAEAVTGSGKTLAF
VVPMLEMLMKKERESPLRKKLVYSIIISPTRELATQIFEVIKQFLLEPELCHFSLCCLVG
GRPVESDIENIEKGAQIVVCTPGRLQDLLAERKHLNLPGRVREMELLILDEADRLLDLGF
NATLSTILQYLPRQRRTGLFSATQTKELQDLVRAGLRNPVLISVREKSSISTPIALENYY
IIVEPQDKFLFLLNFIRNRQMMKGLFFLPTCACVDYWADVLPVFLPDLKIFAIHGKMKQK
RGKILDKFREAESTILLCTDLMARGLDIPEVEWVLQWEPPTNPAALVHRVGRTARGGAAG
CSLLPLLPTEDTYVPFIKSNQKVELQDWKQSSDQIKISDKLRHKVLTILHDQQRKDRTIL
DKGMRAFVSHIRAYSKHECNILLQLKELPLGHIATSYGLLKLPLMPEIREEHKTQFIGPN
DEIDFNSISYRDKQKETSRLQKLQEYKKTGIWPSKKKKKMVKTQAWEQTKQIKQEKKEKR
TQRKEIKKKMIAEGRNNKKRKTVTQEELQDLAADVALLKKLKKRKISDDQFDKAFNVDK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaaagcttggaacaaggttactcccactttatcaattcctgtattgaattgt
atcactaaacaaggttttaatgtcatgactcctatacaagcagcagtgattcctctgctg
ctgtcttgtaaggatgtagtggctgaggctgtaactggttcaggaaaaaccttagctttt
gttgtacctatgttagaaatgttgatgaagaaagaacgagagagtccacttagaaaaaaa
ttagtctattcaataattatctcgccaacaagagaattagcaactcaaatttttgaagtt
attaaacaatttcttctggaacctgagctatgccatttctctctatgctgtctggtcggt
ggacgtcctgttgaatctgacatagaaaatattgaaaagggagctcaaattgtagtttgt
actccaggaaggttgcaggacttgttagctgaacgtaaacatcttaatttgccaggacga
gttagggaaatggagctcctaatattagatgaggcagatcgtcttttggacctaggtttc
aatgccacattatcgacaattttacagtaccttccacgacaaagacggactgggctattc
tcagcaacacagactaaggagcttcaagatctagttagagctggtcttaggaaccctgta
ctgattagtgttagagaaaaatcaagtataagcactcctattgctcttgaaaattactac
ataattgtagaacctcaagataaatttctttttctcttgaactttattagaaatcgacaa
atgatgaaaggccttttttttcttccaacctgtgcttgtgtagattattgggctgatgtg
ctgccagtgtttttgccagacttaaaaatatttgcaatacatggtaaaatgaaacagaaa
agaggaaagattctggataagtttagagaagctgaaagtactatattactatgtacagac
ctaatggcaagaggcttagacattccagaagtagaatgggtgcttcaatgggagcctcca
acaaatccagcggcattagtacaccgagtgggaagaacagctcgaggaggggctgcagga
tgttctcttttacctctcttacccactgaagatacatatgtcccatttataaagagtaat
caaaaggtagaacttcaggattggaagcagtccagtgatcagatcaagattagtgataag
ttaaggcataaggtattaacaattctccatgaccaacagagaaaggatcggactattctt
gataaaggaatgagagcatttgtctcacatattagagcttactcaaaacatgagtgtaat
attcttttacaactcaaagaattacctttaggtcatatagcaaccagttatggtctccta
aaattaccgttaatgcctgaaataagggaagaacataaaacacaatttattggcccaaac
gatgaaattgacttcaatagtatatcttacagggataagcagaaagaaactagtcggctg
cagaagttgcaagaatataaaaaaactgggatctggccctcaaaaaagaaaaagaagatg
gtgaaaacacaagcatgggaacaaactaaacaaattaagcaagagaagaaagagaagcgt
acgcaacgaaaagaaataaaaaagaagatgatagcagaaggaaggaataataaaaagaga
aagactgtcactcaagaggagctacaggaccttgcagctgatgtagcactattaaagaaa
ttgaagaaacgaaagattagtgatgaccagtttgataaggcgttcaatgttgacaaataa
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