Pieris brassicae (large cabbage white): 123714157
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Entry
123714157 CDS
T08632
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pbx
Pieris brassicae (large cabbage white)
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pbx01009
]
123714157
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123714157
04131 Membrane trafficking [BR:
pbx04131
]
123714157
03036 Chromosome and associated proteins [BR:
pbx03036
]
123714157
Enzymes [BR:
pbx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123714157
Protein phosphatases and associated proteins [BR:
pbx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123714157
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123714157
Membrane trafficking [BR:
pbx04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123714157
Chromosome and associated proteins [BR:
pbx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123714157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
123714157
NCBI-ProteinID:
XP_045524280
LinkDB
All DBs
Position
9:complement(3690787..3708274)
Genome browser
AA seq
1073 aa
AA seq
DB search
MSSASPPTVPGRQSGGDAKKTQPPSSIVTRNGARKAKIQTRARTAGTAKPSASVVAAKRK
AQLKKKTTVETVLRDHYQITMDAKTKVKGPTGFVTEPRMVEHKCLWDDNYPENPLRLISV
INRCHELNLIEQCTEINPRAASKEEILNLHDVSVYSMMEKTHQNSDVEYLEDLSSCYDAV
YIHPSTHELALIAAGSTIKLVDHLIKGDIQNGAAFVRPPGHHAMKAEPCGYCIYNNVALA
AKHALQHGLSRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGSFWPNLRQSNFDYI
GEGKGEGFNFNVPLNQIGMKDADYLAIWYQLLLPMAYEYQPELILISAGYDAAIGCPEGE
MLITPACYATLTHLLMGVCSRIAVVLEGGYCPLSLAEGAALTLRTLLGHPPPMGEALTEP
TDSIQESILNCIYAHKNHWKCFYQPTYSLYSDAKNVCDVDKDKHTVIVKWEGDETRPDKY
PTRNCYPLQSIETKKNIAVRLRQLQLATDLTLTQYPVCYIYDEAMLKHKNICEPGHVECP
QRIMRVHERHMDFGLLDRVHLLTARRATDEDILAVHSEKHLTRLKDLSSMKLRELHNSKD
TYDSVYFHPDSLESATTAAGCVLQMVDSVLSGLAGSGVCVVRPPGHHADKSTPCGFCLIN
NVAIAAQYALKRVKRVLILDWDVHHGNGTQSITLDNEQILYISLHRYDNGTFFPQSRDAD
HTVVGTGKGKGFNVNIPWNKRGMGDAEYIAAFTQVVMPIAREYHPDLVLVSAGFDACFGD
PIGGCKVSPECYGVMTHMLRSLAGGRVILCLEGGYNITSTSFAMAMCTKALLGDPIYTHY
DSKASCNWSAIESINDVIKVHKKYWKNLKFQLALPIENVPENVSPKSTLEEGLANLTIGC
TDGIHCGTDDEAEGSSKNTDTGSKDQSPKTDDSKPKTLVDFLSDNMQAIVDGEMFAVVPL
PGCPHLDSLYAIPSDVKFQQGVKCTDCDHTIENWVCLHCYITACGRHINGHMASHYSTTH
HPLSLSLADLSVWCYPCDAYVDNPLLYDAKNNAHKCKFGEEMPWCYKDGIHMG
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgcttcaccgccaacagtacctggacgccagtcaggtggagatgctaagaag
acacaaccaccatctagcattgttactcgaaatggtgcaagaaaagctaaaatacaaaca
cgtgcccgtacagccggtactgcaaaaccttcagcatctgttgtggcagctaagcggaaa
gcgcaattgaagaagaaaacaacagtagagacagttttgagggatcattatcaaattaca
atggatgcaaagaccaaagtaaaaggtcctacaggttttgttactgagccacgcatggta
gaacataagtgtttgtgggatgataactatccagaaaatccactgcgactcataagtgtc
ataaatagatgccacgagttaaacttaatagaacaatgtactgaaataaatccccgggct
gcatcaaaagaagaaattttaaatttacatgatgtatctgtttattccatgatggagaaa
actcaccagaacagtgacgttgaatatttagaggatttatcatcgtgttatgacgctgtt
tacatacacccaagtactcacgaactggctctcatagcagcgggttctacaataaaactg
gttgatcacttaataaaaggggatatacagaatggagctgcatttgttaggcctccagga
catcatgctatgaaggcggagccttgcggctattgtatatacaataatgtggcacttgct
gctaaacatgcacttcaacacggactaagtagaatacttatagttgactgggatgtacat
cacggccaagcaacacaacaaatgttttataacgatccaagggtcgtatatttctcgata
catcgctatgagcacggatcgttttggcccaatttgcgtcaatccaatttcgactacatc
ggcgaaggcaagggggagggttttaacttcaatgtaccactgaatcaaatcgggatgaaa
gatgccgactacctggctatatggtaccagttactcctaccgatggcttatgagtaccaa
ccggagctcatcctgatatcggcgggttacgacgctgcgatcggatgtccggagggtgaa
atgctgataacaccagcgtgttatgcgacattgacgcatttgctcatgggcgtatgttcc
cgaatagcagttgtgttagaaggagggtattgccctctgtctttagcggaaggagctgcc
ttaactttacgaacgctgctaggtcatccgccgcccatgggcgaagctcttactgagcct
acggactcaatacaagaatcgatcttaaactgcatttacgcgcacaaaaatcattggaag
tgtttctaccaacccacatacagcttgtactcggatgcaaagaacgtatgcgatgttgac
aaagacaaacatactgttatagtgaagtgggagggagacgagacaagaccggataaatat
ccaacaagaaattgttatcccttacaaagtattgaaacgaaaaagaatattgcagttaga
ttaagacagttgcagttagcaactgatttaacgctgacccagtatccagtgtgctacata
tatgatgaggccatgttgaaacataaaaatatttgtgaaccgggtcacgtggaatgtccc
caacgaataatgcgtgtccacgagcgacatatggactttggtctgttagatcgcgtgcat
ttgctgacggcgagacgcgccaccgatgaagacatactcgctgtgcactcggagaaacat
cttaccagattgaaagacttgtcatcgatgaagcttcgagagcttcacaattcaaaggac
acatacgattccgtgtattttcatcctgactcgctggagagcgctactacggcagccgga
tgtgttttgcagatggttgactcggtattatccgggctagccggatcaggggtgtgcgtg
gtccgtccacccgggcatcatgctgataaaagcactccctgtggcttctgtctcatcaac
aatgtggccatcgcagcacaatacgccttaaaacgcgtaaaacgagtgttaatactcgat
tgggacgtacatcatggaaatgggacgcaaagtattacgttggacaacgagcagatctta
tacatatccctacatcgctatgacaatggcacgttcttcccgcaatcacgtgacgctgac
catacagtggttggaactgggaaagggaaaggattcaacgttaatattccctggaataag
cgcggtatgggcgacgcagaatatatagcggcgttcacgcaggtcgttatgccgatagcg
agagagtaccatcccgatcttgttctggtatcagccggctttgatgcctgttttggagat
ccaatcggaggttgcaaagtatcaccagaatgctacggagtaatgactcacatgctcaga
agtctagctggtggccgtgtcatactttgtctggaaggtggttataacataaccagtacc
tcgtttgctatggctatgtgtacgaaagctcttctaggcgatccaatttacacacattac
gactcaaaagcaagttgcaactggtcagctattgaatcaataaacgacgtcatcaaagta
cacaaaaagtattggaaaaacttaaagtttcaactggctttaccaatagaaaatgttcca
gaaaatgtctcaccgaaatcgacgttagaagaaggactagccaatttaactataggttgc
actgacggtatacactgcggtaccgatgatgaagccgagggtagttcaaaaaatacagat
accggctcgaaggaccaaagtccaaaaactgatgattccaaacctaagacgctagtagat
tttttatcagataacatgcaagctatagttgatggagaaatgtttgctgttgtgccttta
ccgggatgtccccatttggattcattgtacgcaataccaagtgatgtgaagtttcaacaa
ggcgttaaatgtactgactgtgatcatactattgaaaattgggtctgccttcattgttat
attacagcctgcggtcgacatataaacggccatatggcatcgcactattctaccacgcat
catcctctatctctttctctcgctgacctctccgtatggtgctatccctgcgatgcatat
gttgacaatccattgctctatgacgccaagaataatgcgcacaaatgtaaattcggtgaa
gaaatgccctggtgctataaagacggtatccatatgggataa
DBGET
integrated database retrieval system
