Pieris brassicae (large cabbage white): 123714985
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Entry
123714985 CDS
T08632
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123714985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123714985
03009 Ribosome biogenesis [BR:
pbx03009
]
123714985
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123714985
Spliceosome [BR:
pbx03041
]
Complex A
U1 snRNP components
U1 related factors
123714985
Complex B
123714985
Ribosome biogenesis [BR:
pbx03009
]
Eukaryotic type
Pre-60S particles
Helicases
123714985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
DUF2443
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
123714985
NCBI-ProteinID:
XP_045525673
LinkDB
All DBs
Position
10:complement(8680663..8688612)
Genome browser
AA seq
668 aa
AA seq
DB search
MYDDRRGGRGGGRGGPRGGRGGRGGSRGGRSSDRSQDRGNRFGGSRGGRDGGRGGSRGFG
GRDRGGRDGRDDFRSNFKNEQPGGALRKIRWDTITLTPFQKNFYNPHPNVQMRSMAEVEA
YRSQHQITVKGRDVPPPSVYFEEGGFPDYAMKEILKQGFPHPTPIQAQGWPIALSGRDMV
GIAQTGSGKTLAYILPAIVHIINQPRLLRDEGPIVLVLAPTRELAQQIQQALVSMNGDTV
DRDRMPGPMDVVATDFGQNVQVRNTCIFGGAPKGPQGRMLERGVEIVIATPGRLIDFLEK
NTTNLHRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQNLAEEFL
VDYIQINIGSLSLSANHNILQIVDVCEEWEKNDKLLTLLNEISSEEETKTIIFAETKRKV
DDITKTINRAGWHALAIHGDKNQQDRDYVLGQFRQNPGAILVATDVAARGLDVEDVKFVI
NYDYPNNSEDYVHRIGRTGRSHNTGTAYTLFTPNNSAKAKDLMSVLSEANQVVNPRLMEL
AQCGTGFKGKGFSRGGSRYRDRDSDSGRGRGRGRDGGRGSRGGRPETRGSRWDNNDSNGQ
SGFNREDGFQRQSFGRDQSRESFRGRGRGRGRGGFGQGFDQGQQGFPDQTQGYQPSSYYN
MYGQQQAQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgatagacgcggagggcgcggcggtggacgtggtggtcccaggggcggtcgt
ggaggcaggggtgggtctagaggaggtcgttctagtgatcggtctcaagacaggggaaac
agattcggcggcagccgtgggggacgagatggtggtaggggaggcagtcgaggattcggt
ggacgcgatcgaggtggccgagacggcagggatgatttccgcagcaatttcaagaacgaa
caaccaggtggagcgcttcgtaaaattcgctgggatacaataacgcttactccatttcaa
aagaatttctacaatcctcaccccaatgttcaaatgcgctcaatggcggaagtggaagct
tatagaagccagcaccagattacagttaaaggtcgtgatgttcctccaccaagtgtatat
tttgaagagggtggcttccctgattatgcaatgaaagagattctaaagcaaggctttcca
catcctacaccaattcaagctcaaggttggccaattgctttgtctggaagagacatggtt
ggcattgcacagacgggttcaggaaagactcttgcatacattttaccagctattgtccac
attattaaccagccaagattactaagggatgagggaccaattgttctagtcctagctcct
actagggagcttgcgcagcaaattcaacaggctttggtatccatgaatggggacacagtt
gaccgagacagaatgccaggccccatggacgttgtggcaacagattttggtcaaaatgtt
caagtgcgcaatacctgtatatttggtggagctccaaaggggcctcagggcagaatgttg
gaacggggagttgagattgtcattgcaacaccaggaagacttattgatttcttggagaaa
aatacaacaaatctacatcgctgtacctatctggtgttggatgaagcagataggatgttg
gacatgggttttgagcctcagataagaaagatcattgagcaaatacggcctgacagacag
gttctgatgtggtccgcaacatggcctaaagaggttcaaaacttagctgaagaattcctc
gtagattacatacagatcaatattggttcactttctttatccgctaaccacaacattcta
caaatcgtcgatgtctgtgaggaatgggagaaaaatgataaactgcttacactacttaat
gagatttcatcagaagaggagaccaaaaccatcatatttgcagaaacaaagagaaaggtt
gacgacataacaaaaaccatcaaccgggcgggttggcacgcgctcgccattcacggcgat
aaaaaccaacaggacagggattacgttttaggacaattcaggcaaaacccgggtgcgata
ttagtcgctaccgatgtagcggctagaggacttgacgtcgaggatgtgaagttcgtgata
aactacgactatccaaacaattctgaggactacgtgcacagaatcggacgtacgggacgc
tcgcacaacaccggaacagcgtacacgctcttcacgcctaataattccgccaaggcgaag
gacctaatgtcagtgttgtcagaagcaaatcaagtggtaaaccctagattgatggaactg
gcgcagtgcggcacaggtttcaaaggaaagggattcagtcgtggcggcagtcggtaccgt
gaccgtgatagtgactctgggcgcggtcgcggcagaggaagggacggaggcagggggagc
aggggaggtagaccggagaccagaggctcaagatgggacaataacgactcgaatggccaa
tccggcttcaacagggaagacggttttcagcgccagagttttggacgtgaccagagccgt
gagtcattccgcgggcgtggcagggggcgcggtcgcggagggttcggtcagggcttcgac
cagggacagcagggcttccccgatcagacgcaaggataccagccgagtagctattataat
atgtatgggcagcagcaggctcaatag
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