Pieris brassicae (large cabbage white): 123715341
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Entry
123715341 CDS
T08632
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123715341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123715341
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123715341
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123715341
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123715341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCHC_2
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
123715341
NCBI-ProteinID:
XP_045526268
LinkDB
All DBs
Position
10:complement(8130318..8136891)
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AA seq
291 aa
AA seq
DB search
MEVIVANVDHIKFDIDYALEQQYGALPLPFPGMDKSTAAVCEFFGQSGGCNNGPRCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLTGLCPDGASCKYMHPRFELPAPPEQTK
DTKRLPVCHYCSEVGHKASTCHKLPPDQREVAQKQEEARYRALGYLKQVGEEDSQQTLHR
MQRMMHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSNQPGQNNSNVFKKTN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaagttatagtagctaatgttgatcatattaaatttgatattgattatgctctcgaa
cagcagtatggagcattgccattgccatttccaggaatggataagtctacagcggcggtt
tgtgagttttttggacaatctggaggttgtaataacggaccccggtgtccttataggcat
gttcgtggcgatcggactgtggtgtgtaaacattggttgcgagggctttgtaaaaagggg
gatcagtgcgaatttttacatgaatatgatatgactaaaatgcctgaatgttacttttat
gctagatttaatgcttgtcataataaggagtgtccatttcttcacattgacccagaaagc
aaaatcaaagactgtccttggtacgatagaggtttttgtagacacgggccacattgtcgc
caccggcatgttaggcgtgtcctttgtacgaactatttaactggattatgccctgacggt
gcaagctgcaagtacatgcatccgcgatttgagttgccagcacctcccgagcagactaaa
gacacaaaacgactcccagtttgtcattactgttcagaagttggccataaagcttccact
tgtcataaacttcctccagatcaaagagaagttgctcagaaacaagaagaagccaggtac
agggcattaggttatttgaaacaagtgggagaagaagattcacaacaaactctacacaga
atgcagcgaatgatgcataagcctctcgaagaagtcacgtgcttcaaatgcgggacaaaa
ggacactatgctaataagtgtcccaagggacatctagcttttctatcaaatcagccgggg
caaaataatagtaacgtgttcaaaaaaacgaattaa
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