Pieris brassicae (large cabbage white): 123715457
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Entry
123715457 CDS
T08632
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123715457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123715457
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123715457
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123715457
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123715457
U7-dependent histone pre-mRNA processing factors
123715457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
DUF5588
Motif
Other DBs
NCBI-GeneID:
123715457
NCBI-ProteinID:
XP_045526422
LinkDB
All DBs
Position
10:16983875..17003151
Genome browser
AA seq
685 aa
AA seq
DB search
MTTNPRKGVDAVPYEESDQLTIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPFVDLIEADEVDLLLISHFHLDHSGALPWFLTKTSFKGRVFMTHATKAIYRWLVSDYIK
VSNISTEQMLYTESDLEGSMDRIETINFHEEKDVRGVRFWAYNAGHVLGAAMFMIEIAGV
KVLYTGDFSRQEDRHLMAAEIPTVHPDVLITESTYGTHIHEKREERESRFTSLVSDIVMR
GGRCLIPVFALGRAQELLLILDEYWSLHPELQDIPIYYASSLAKKCMAVYQTYINAMNDR
IRRQIAVNNPFIFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGV
IIAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFINILKPP
HVVLVHGEQNEMSRLKAALQREHRSRLAVHTPRNTQLLALTFRGDKTAKVMGSLAVEPPQ
PGDTLQGVLVKRNFNYHILAPSDLNKYTELSQSEVVQRQSIQYTGSNAVLRHAVLRLAGT
VEFLSETRWRLYGCLDMIIEPPVITLEWQAQPVSDMYADAVVAALLAAASMPQPTHLPLA
PKLDRMHFKECVIEMLQEMFGEDSVPKMFKGEKLHVEVNGRRADIDLLALDVTSNDEALE
RMVQSAISKLYAALAPVKPPPPPTC
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaatccacggaaaggcgtcgatgctgtaccatatgaagaaagtgatcaacta
actattcgacccttaggtgctgggcaagaagtagggcgctcatgcataatgcttgaattt
aaagggaagaaaataatgctggactgcggcattcacccaggcttatcaggaatggatgca
ttaccatttgttgatcttattgaagctgatgaagtggatttattgcttatatctcacttt
catctggaccatagtggagcactgccttggtttctgacaaaaacatcatttaagggaaga
gtttttatgacacatgcaacaaaagcaatttacaggtggcttgtatcagattacattaaa
gttagtaacatatcaacagagcagatgttgtatactgagtcggatttagaaggatccatg
gatcgtatagaaacaatcaactttcacgaggaaaaagatgtgcgaggagtgaggttctgg
gcatacaatgctgggcatgtgctcggagctgctatgtttatgattgagattgctggtgtt
aaggttttatatacaggagatttttcaagacaagaagacagacatttaatggccgctgaa
atacccactgtacatcctgatgtattgataacggaatcgacatacggcacacacatacac
gaaaaacgcgaggagcgagagagtcgtttcacaagtcttgtgagtgatattgtgatgcgt
ggtggtcgctgccttatacctgtctttgctttgggacgagcacaggagttattacttata
ttggatgaatattggtctcttcatcccgagctgcaagacattcctatatactacgcttcg
tcactcgcgaagaaatgtatggccgtgtaccagacctacatcaacgccatgaacgaccgc
atccgaagacagatagcggtcaacaatccgtttatcttcagacatatctctaatttgaag
ggaatagatcatttcgaggatataggaccctgtgtgataatggcctctccgggaatgatg
cagtctggactatcccgggaactgtttgagtcgtggtgtacggatcctaagaacggtgtt
attatagctggttactgcgtggaagggactttggctaagacaattctatcagagcccgaa
gaaatcacgacgatgtcaggccaaaagctgcctttgaagatgtccgtggattacatctcc
ttctcagcgcacactgactaccagcaaacgtcagaattcatcaatatattgaaaccaccg
catgtggtgttggtgcacggagaacagaatgagatgtcacgtctgaaggcggcgctgcag
cgggaacatagatcgaggctggccgttcatacgccgaggaacacacaactactggcactc
actttcagaggggataaaactgcaaaggtgatgggttcgctagccgtagagcctccacag
cccggggacacattgcagggtgtgctcgttaaacgaaatttcaattaccatatattagcg
ccttcagatctcaataaatacacagaattaagtcagtcagaggttgtccaacggcaatcc
atccagtacacgggatccaatgccgttcttcgtcacgccgtgcttcgtttggccgggacc
gtcgagttccttagcgagacgaggtggaggctctatgggtgtctcgacatgattatagaa
ccgcctgttatcacgctagagtggcaggcgcagccggtgtcagatatgtacgcggacgcg
gtcgtagcggccttactagccgcagcctccatgccccaacccacgcatttgccgctcgcg
cccaaattggaccggatgcactttaaggagtgtgtcatagaaatgcttcaagaaatgttc
ggcgaggactcagtgccgaagatgtttaaaggcgagaagttacacgtggaggtgaacgga
agaagagcggatattgatcttctagcattggatgtaacaagcaatgatgaggcgttggag
cgaatggttcaatcggccatttccaaattgtacgcggcgttggcacccgttaaaccaccc
ccaccgcccacttgctga
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integrated database retrieval system
