Pieris brassicae (large cabbage white): 123715727
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Entry
123715727 CDS
T08632
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123715727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123715727
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123715727
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123715727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
123715727
NCBI-ProteinID:
XP_045526934
LinkDB
All DBs
Position
1:complement(9089486..9091082)
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AA seq
222 aa
AA seq
DB search
MQIDKEESKQTTEDIKICIPGMRISASNKETISGAGTYELDGYIYTYLAGILKSQYDEVK
KVNILSIESPKSPSVLPQMGDIATARVIAINSRLVQCQILCVGPTVLARPYRGILKKEDI
RDMDKDRIDPYKCFRPGDVILARVLPMTELHAYHLSTAENELGVVIATAEGSPQGVSMVP
ISWSEMQCPTTLNKEPRKVARVIPETINKEFVFASQPELGKS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagataaagaagaatcaaaacaaacgacagaagacattaaaatatgtatacct
ggtatgcgtataagtgcatctaataaagaaactatatcaggggctggaacttatgaatta
gatggttacatatacacgtatctagcaggaatattgaaatcacaatatgatgaggttaaa
aaggtaaatattttatccatagaaagtccaaaaagccccagtgtgcttcctcaaatggga
gatatagctacagcaagagtaatagctattaactcccgcttagtacaatgccagatactt
tgtgtgggtccaacagtgttagctaggccatacagaggaattctgaaaaaggaagatata
agagatatggataaagatagaattgatccctataagtgctttagacctggagatgttatt
ttagcaagagttttaccaatgacagagctgcatgcttatcatctatccaccgcagaaaat
gagcttggtgttgtaattgcaactgctgaaggttctccacaaggagtgagcatggttcca
atcagctggtctgaaatgcagtgccctacaacattaaacaaagagcccaggaaagtagca
agagtaatacctgaaactatcaataaagaatttgtgtttgcaagtcaacctgaattgggg
aagagttga
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