Pieris brassicae (large cabbage white): 123715816
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Entry
123715816 CDS
T08632
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03013
Nucleocytoplasmic transport
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123715816
09122 Translation
03013 Nucleocytoplasmic transport
123715816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123715816
03041 Spliceosome [BR:
pbx03041
]
123715816
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123715816
Spliceosome [BR:
pbx03041
]
Complex C
Other components
EJC/TREX
123715816
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123715816
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
123715816
NCBI-ProteinID:
XP_045527093
LinkDB
All DBs
Position
10:2635976..2672971
Genome browser
AA seq
1405 aa
AA seq
DB search
MSTLTKFISEYCKTWEKSGRDSYIKLITQYIKDEGKSPLFTKSGKLSGLSQSIYDLLLSE
LKGYLKKDAVISALREITMIHADMPSILLDVVCVLDAETSLDVQTEERSNFCYLVRDLES
FLSDKLLKERLEIDTLQDVGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYAKLIV
ELNQEISEDTEWKSILEIIQSLIGCFNLDPNRVLDIILESFEARPHLDKLFISLIKHYMC
DPRVISEVLGFKLGNMDVLDNYKEPPHLMTVIALLLQHQVISLDDIYPWLRPDDIIMAKE
ADKELKSVQDFLRKLNIVSTKGPQANGATEFIEEKSDPQEYWSNQKLVLSEALIRVCAWR
EFSALFSRIQVSAMPPRPAKALCDMLHAVIEPLYRTKCRVAPKIMGIPIPPLKSKLAPKA
CKTFEDMKETVIPALILLGPALHHDPILMYKVIRILRTSRSAVGDPLEHEALTVLDAAIL
PALTLMEGNCCMAEEVYTLLKLYSYQCRYCIYARWKNESGEKIPSLMRVRGNSLQRIKHI
MKRVSKENIKPQGRLIGKLSHAAPAFLFDYMLLQIQTYDNLIGPVVESLKYLTSLSLDVL
GYCLVEALCAGRGIGASGAAHPPWLQALAAFAGAAFKKHNIELTGLLQFVANRLKAQQSQ
DLLILKEIVQKMAGIEAAEEMTPEQLDAMAGGELLKGEAGYFSQVRNTRRSSARLKDAVV
GNNLDIALCILSAQQRHCCVWKEGEEISGESSGSQLKVVGRLADQCQDALVQLGTFLASS
HAPDEYAARLPALPELLRDYHVDADVAFFLHRPVIAQIIAARVESLRKASDSKSDSLEKS
ITRYSIASKEALEPIVTSITPLLPNKVWEDISPEFYVTFWSLSMYDLRVPVESYEREIDR
LKLAASAATKDSQGTKGKKEQERFNSLIEKLQDERRRQEDHVSRVHARLSRECSGWFPAR
AVKSAKNETVTRLMQLCLFPRCVFTATDALYCAQFVHTVHSLKTPNFSTLLCYDRLFCDI
TYSVMSCTEAEAGRYGQFLCRVLGTAMRWHADRASFHAECAHYPGFVTKYRVSNQFREAN
DHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIKILPHFPVLAKLAQIIE
RKIDKVKEEEKIQRPDLYVLATGYSGQLRYKAPNLMNESDFHQVVEQKPTQPVSVKEDTH
KSDTAASPVQTPESDKKESKSSDRRREEPDREKESKRESRSSNKERNKEELRSKDKSPRE
RSHREDRYLEAISPPHEHRHPSDDVDRDVKRRKVESSGNGKGSKEFEERSPEKEKRKSKL
RGDDRKERKMSRKRQERIEESPILEQKRRRDEQKAILKMTSHQNGSQEDHHYEKYHKREK
SPFRDRSLEEPRDKHRRSNESKIRR
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgagtactctgacaaaattcatatcagagtactgcaagacatgggaaaaatcaggcaga
gactcatatatcaagctaatcacacaatatatcaaagatgaaggaaagagtcccctattt
acaaagtcaggcaaattgtctggcctttcacaaagtatctatgatttgttgctctctgag
cttaaaggataccttaagaaagatgctgtgatttcggcattgcgtgaaataactatgatt
catgcagatatgccatctatattattagatgttgtctgtgttttggatgcagaaacttca
cttgatgtgcaaacagaggagcgatcaaacttctgctatttagtccgggatttagaatct
ttcttatctgacaaactattaaaagaaagactagagatagacactttgcaggatgttgga
acactgaaaaacaaaaacttttatactaaattcataaaaataaaaactaaactatattat
aagcagcgtaaattcaatctttttagagaagaaagtgaaggatatgccaaattaattgtt
gaactaaatcaagaaatttcagaagacacggaatggaaatctattttggaaataatacaa
tcacttattggttgttttaatctagacccaaacagagttttagacataatactggagtca
tttgaagcacgtccacatttagataaattgtttatttcgcttattaaacactatatgtgt
gatccacgagttatatcagaggttctcggatttaaacttggaaatatggatgtattggat
aactataaagaaccgccacacttaatgaccgtcatagctttattattacaacatcaagtt
atttctttagatgacatatatccttggctacgacctgatgacataataatggccaaagaa
gccgataaggaattgaaatctgtccaagattttctacgtaagctaaatatagtttccaca
aaaggacctcaagcaaacggagcaacagaatttatagaggagaaatcagatccacaagaa
tattggtccaatcaaaagctagttctcagtgaggcattgataagagtatgcgcttggcgt
gagttctcagcactgttcagtcggatacaggtatcagccatgccacctcgacctgccaaa
gcgttgtgcgatatgcttcatgccgttattgagccattgtatagaacaaaatgccgcgtg
gctccgaaaataatgggtattcccattccgccattgaaatcaaaattagcaccaaaagca
tgtaaaacatttgaggatatgaaggagacggtgataccagcgctaatcttacttggacca
gcacttcatcacgatcccattttgatgtataaggttatacgtatactacgaacgtcccgt
tcggcagtaggcgatcccctcgaacacgaagcgttgaccgtattagatgcggcaatattg
ccagctcttacactcatggaaggcaactgttgtatggccgaggaggtttatacgttactc
aagttatattcataccaatgcagatactgcatatatgccagatggaagaatgagtctggt
gaaaaaattccatcacttatgcgcgtgagagggaattcattacaacgcataaaacacata
atgaaaagagtatcaaaagaaaatataaaacctcaaggacgacttattggaaaattgtcg
cacgcggcgcccgctttcctcttcgattacatgcttttacagatacaaacttatgataac
ctaataggaccagtggtggaatccctcaaatatttgacgtcactgtcactcgatgttctg
ggttattgtcttgtggaagcactctgtgcggggagaggtatcggcgcaagtggtgcggca
catccgccatggctacaggcgttagccgcgtttgcaggcgcggcctttaagaaacacaac
attgaattgacgggattattgcagttcgtcgctaatcgcttaaaggctcaacagagtcaa
gatttgctaatacttaaggagatagttcaaaaaatggctggaattgaagccgctgaggag
atgacacctgaacaattagatgcaatggcgggcggtgaattactcaagggggaggctgga
tacttctcacaagtgcgaaacacaagacggtcttcagcgaggctaaaagacgcagtcgtg
ggcaacaatttagatattgccctttgcattttgtccgcccaacaaagacattgttgtgtt
tggaaagaaggtgaggaaataagcggggaatcgagtgggtctcagttaaaagtagtggga
cgtttggcggaccaatgtcaggacgcgctcgttcagcttggcacgttccttgcgtcttcg
cacgcgcccgacgagtacgctgcgagattaccggctttaccggaactgcttcgggactac
cacgtagacgcagatgtggcgttcttcctgcatcgtccagttatagctcaaataatcgct
gcgagggtcgagtcccttcgcaaagcctctgatagtaaatcggattctctcgagaagagc
ataacgcggtacagcattgcctccaaggaagccctagaaccaattgtaacatccataaca
cccctcctgccgaataaagtatgggaagatatttcgccagagttctacgttacgttttgg
tcactatctatgtacgacttgcgcgtgccggtggagagctacgaaagggaaattgataga
ttgaagctggctgcctcggctgccaccaaggactcccaagggaccaaggggaagaaggaa
caggaacgctttaacagccttattgaaaaattacaggatgaacgtcgtcgtcaagaagac
cacgtgtcccgcgttcacgcgcgtttgtcccgcgagtgtagtggctggttcccagcgaga
gccgtcaaatctgccaaaaacgaaactgtcacgcggctgatgcaattgtgtctgtttccg
cgttgcgtgtttacggcgacggatgcattgtactgcgcccaatttgtgcatacagtccac
tctctgaagacgcccaacttttctacgttgctgtgttatgatcggttattctgcgatatc
acgtactcagtgatgtcctgtactgaggcggaagctggtcggtacggtcagttcctctgc
cgggttttgggcacagctatgcgttggcacgcggacagagcctccttccacgcggagtgt
gcgcattaccctggctttgtgaccaagtatcgtgtttccaaccagttcagagaggccaat
gaccacgttggatatgagaattatagacacgtatgccacaaatggcactacaaaataacg
aaggcgatggtggtttgcctggattccggtgactacgttcaaatacggaacgcgttgatt
gtcctcatcaagatattgccccactttccagtcctcgctaagctggctcagattattgaa
aggaaaattgataaggttaaagaagaggagaaaattcaaaggccagacttgtatgtgttg
gctacaggttatagtggccaattgaggtataaagcaccgaatctgatgaatgaaagcgat
tttcatcaagtggtagaacagaaaccgactcagcccgtcagcgtcaaagaggacacccat
aagagtgacacggccgcctcaccagttcaaactccagaaagtgacaaaaaggaatcaaaa
agcagtgatagaagacgtgaagagccggatcgcgagaaggagtcaaaacgtgaatcgaga
tcgtcaaacaaagaaagaaataaagaagaattaagaagcaaagacaagtcgccgagagaa
agatcgcatcgagaagaccgctatttggaggcaatatctccgcctcatgaacacaggcat
ccgtctgatgacgttgatcgtgatgtgaaacgacgtaaagttgaaagcagcggcaatggc
aagggtagtaaagagtttgaagaacgttcgccagaaaaagagaaaagaaagtctaaactt
agaggtgatgatcggaaagagcgtaagatgagcagaaaacggcaggagagaattgaagag
tcacctatattggaacaaaagcgacgaagagacgaacaaaaagcgatattgaagatgacc
agtcatcaaaatggttctcaagaggatcaccattatgaaaagtaccataaaagggaaaag
tcaccattccgggatcgctcactagaagagccaagagacaaacatagacgctccaatgag
tcaaaaatcagaagatag
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integrated database retrieval system