Pieris brassicae (large cabbage white): 123715901
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Entry
123715901 CDS
T08632
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123715901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123715901
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123715901
U7-dependent histone pre-mRNA processing factors
123715901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
SAP
MBL_MAP1B
Motif
Other DBs
NCBI-GeneID:
123715901
NCBI-ProteinID:
XP_045527217
LinkDB
All DBs
Position
11:11197651..11211578
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AA seq
728 aa
AA seq
DB search
MTSIIKLHCLSGAGDESPPCYVLQIDEFKFLLDCGWDEKFDTDFIKELKRHVNSIDAVLL
SHSDPLHLGALPYAVGQLGLNCPIYATLPVYKMGQMFMYDLYQSHKNMTDFNLFTLDDVD
TAFDRITQLKYNQSIDMKGKGLGLRITPLPAGHLLGGTIWRIAAPGEEDIVYAPDFNHKK
ERHLNGCEIEKIMRPSLLLLGAMNADYVQQRRRLRDEKLMTTILTTLRGGGSVLVCTDTA
GRVLELAHMLDQLWRNKDSGLVAYSLLLLSNVSYNVVEFAKSQIEWMSDKLTRAFEGARS
NPFALRHLHLCHSVAEVTRTPGPKVVLASFPDLESGFARDLFILWSQQSQNSIVLTARTS
PGTLARDLIDKGGDRTIEMTVRRRVRLEGAELEEFMQQQRTKVKDPVKEEVDGLSSDSES
DGELEMWVVTGRHDIPVRAEYRAGGCFKSNKRHHAMYPCHEDRTRADDYGEIIRPEDYRL
AEIVDAEGEIRDVPPAPPQKPEPEEEIIEIPSKCMSSVRQIAIKASIQYIELEGRCDGES
LLRVVAHAKPRAIVALRAGANAVNALRKHCENEGIEKMYTPGKGDVVDATTESHIYQVKL
TDSLMSGMSWRTAGDAELAWLTATVAEPRAREPNSEESVLDDMIALEACEGNTPGHAAAF
INSLKLSELRSALAKHGLNAEFNAGALECCNGTIAIRRVENGRIALEGVLSEEYYKVREL
LYDQFAIV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattataaaattacattgcctctctggagctggggatgaatctccaccttgt
tatgtgttgcaaatagatgaatttaaattccttttagattgtggctgggacgagaaattc
gatacagactttattaaggaattaaaaaggcatgtaaatagtatagatgcagtactttta
tcacattctgacccgctacacttaggagcacttccatatgcggttggacaattgggtctt
aactgtccaatatatgccacattacctgtctacaaaatgggccaaatgtttatgtatgat
ttatatcagtcacataaaaatatgacagattttaacctgtttactttagatgatgttgat
actgcatttgatagaataacccaattgaaatataatcagagtattgatatgaagggcaaa
ggtttaggactccgtataacaccattaccagcaggacatcttcttggtggaaccatatgg
cgtatagctgccccaggtgaagaggatattgtttatgcaccagattttaaccataaaaag
gagaggcatcttaatgggtgtgaaattgaaaagattatgagaccatcgttgttactattg
ggagctatgaatgcagattatgtgcagcagaggagaaggttgcgggatgaaaagcttatg
acaacaatactaaccactttacggggtggtggatctgtgctggtttgcacagacacagca
gggcgagtcttagagttagctcacatgttggatcagctttggcgaaataaggactcgggg
cttgttgcgtattcattgttactcttgtcaaatgtcagttacaatgtggtggagtttgct
aagtcacagatagaatggatgagtgacaagctgactcgtgcttttgaaggagcccgaagt
aatccttttgctctacgacacctccatttatgtcactcagtggctgaggtcactaggacg
cctggtcccaaggtggtgttggcttcttttccagacttagaatcaggattcgccagagac
ctctttatattatggtctcaacaatcacaaaattctattgtattaactgccagaacatca
ccaggcacgctcgcccgagacctcatagacaagggcggagaccgtaccatagagatgaca
gtacgccgccgagtacggctagagggcgcagaactagaagagttcatgcaacagcaacgg
actaaagtcaaggatcctgtgaaagaagaagttgacggtctatcatcagattccgagtcg
gatggtgaattggagatgtgggtggtgactgggcgccatgacatccccgtccgcgcagag
tatagggccgggggctgcttcaagtccaacaaaagacaccacgccatgtacccctgtcac
gaggaccgcaccagggcggatgactacggcgaaattattcggcctgaagactacagatta
gcagaaatagtggatgctgaaggggaaatacgtgacgtacctcccgccccaccgcagaaa
cctgagcctgaagaggaaataatagaaataccgagcaaatgcatgtcttcggtgcgacag
atcgcgattaaagctagtattcaatacatagagttggaaggaagatgcgacggggagtcc
ctacttcgagtcgtggcacatgcaaagcccagggctatagtggcgttacgggctggagct
aatgctgttaacgcgctgagaaaacattgtgaaaatgaaggtatagaaaagatgtacacc
ccgggaaagggggacgtagtggatgccaccacggaatcccatatttaccaggtgaaactg
acagatagtctgatgagcggtatgtcttggcgaacagctggagatgcggaactggcctgg
ctgacagctactgtggccgaacctcgcgctagggaacctaacagtgaagaatcagttcta
gacgacatgatagcactagaggcctgtgagggtaacacaccgggtcacgcggcggcattc
atcaactctttgaagctttccgagctgagaagcgctctcgccaagcacggcctaaacgct
gaatttaacgcaggagcgctggaatgctgtaatggaactatcgctattcggagggtggaa
aatggtcgaattgcattggaaggagttttatcggaagagtattacaaagtgagggagttg
ctctatgaccagttcgcgatagtttaa
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