Pieris brassicae (large cabbage white): 123716149 Help Entry 123716149         CDS       T08632                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism pbx  Pieris brassicae (large cabbage white) Pathway pbx03018   RNA degradation Brite KEGG Orthology (KO) [BR:pbx00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     123716149  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pbx03019]     123716149 Enzymes [BR:pbx01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      123716149 Messenger RNA biogenesis [BR:pbx03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      123716149   mRNA degradation factors    3'-5' decay     Ski complex      123716149 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD Ski2_N MTR4_beta-barrel DEXQc_Suv3 Helicase_C ResIII MTR4-like_stalk ATPase_2 Matrilin_ccoil Motif Other DBs NCBI-GeneID:  123716149 NCBI-ProteinID:  XP_045527687 LinkDB All DBs Position 11:14312722..14326730 Genome browser AA seq 1251 aa AA seqDB search MPVENDDEFSFIKPPPIFDDLNERVKDYLLKPERLSIHQWERSQNHWHRTPDIDSLFRID EDDIGLDTTLEVVRDLLTGEIVGLKEVSVPLEDDEDSLSMSRTPLPPGLATRGTITQNPF LPAGFEEELEQMLEEATKIGEVTVNLDNDEAGKFLGEDILCTPPGCQENVVFSSDGFTLK DQLTDENKQEDKLEDIQININLEEVVNNNTHLAGLWQDDDETTDQKVPIPTKNIDIDAED SDNFLESTIIKPPVVLPEIPVLNITNASVKSGVTSTEWAEMIDVSQPVPEFKEKIKDLAH AYPFELDNFQKQAILKLEEGHHVFVAAHTSAGKTVVAEYAIAMSRRNCTRAIYTSPIKAL SNQKYNDFNKTFGEVGLLTGDLQINATASCLVMTTEILRSMLYCGSDVTRDLEFVIFDEV HYINNAERGYVWEEVLILLPAHVTIVMLSATVPNTLQFADWVGRTKKRKVYVVSTPKRPV PLCHYLYTGSGGKSKNERFLVVDQESKFQLRGYNEAVAAKKSRENDYKKSFGPKGGRQFG NPKAEQTMWVALIDHLRSHDKLPVVAFTLSRNRCDHNAENLMSVDLTTAKEKGHIRSFFQ KCLQRLKEPDRKLPQVIRLQRVLENGIGVHHSGILPLLKEIVEMLFQSGYVKILFATETF AMGVNMPARTVIFDDVTKFDGLQSRSLVPAEYIQMAGRAGRRGLDDTGTVIILCKDGVPD QMTLKEMMLGTPQKLSSQFRLTYAMILSLLRVATVSVEGMMQRSFRELHQILQADTNKKL LQKAELEYSEKCSSPLTPHLAPLATFYDLCTAYVEVLGEIMPLLLSQPKVSKEFVPGRIL LLSAGPYINQLGIYLNGNGPRQTPYKVLVLNTVEEDSNRYNFDRDEAWYRMLSFSSLYDH IGTEESTKEHTILCIAPKNVIAVTRTCLKIDGNIIIQDWEKRQMPRFKDAPVGASCASAV QELSRLSHAARTKVTPLETISLTQALNISTGELLHALDKMNKLKAQIEAQKKSTAIANFR NEFAIVYERKQAERKRDKYKRLLSYESLALYPDYQRRLLVLRELNYIDEHDSVILKGRVA CCMGTNELIIAELVFRNVFTDKNPAEIAALLSCFVFQAKTHVEQVLTEKLDEAVKAIQQI EDDLSGIEVKYGVSQFEGQQERLNFGLVRVVYEWALEKPFAEIMDLTDVQEGIIVRCIQQ LHELLVDVKDAAVAIGDPKLQAKMMEASTAIKRDIVFAASLYTTQKEALKT NT seq 3756 nt NT seq  +upstreamnt  +downstreamnt atgcccgtagaaaatgatgacgaattttctttcatcaagccgccaccaattttcgatgat ttaaatgaacgtgtaaaggattatttactaaagccggagagactatcaatacaccaatgg gaacgttctcaaaatcattggcataggactccagatatagattccttgttcagaattgat gaggatgatattggcctagatactacgcttgaggtagtccgagatttgttgacaggtgaa atagtaggtttaaaggaagttagtgtaccattggaagatgatgaagacagtttatctatg tctcgaacaccactgcccccaggcttggctacaagagggacgattacacaaaatccattc ttaccagctgggtttgaagaagagttagaacagatgctagaagaagcaactaaaatagga gaagttacagtaaatcttgataatgatgaagcaggaaaatttttgggtgaagatatatta tgtaccccacctggttgtcaagaaaatgtagtcttttcaagtgatggattcactttgaaa gaccaactaacagatgaaaacaaacaagaagacaaactagaagacattcaaatcaacata aatttagaggaagttgttaataacaacacacacttagcaggtctttggcaagatgacgat gaaacaactgatcaaaaggtaccaatacctacaaaaaacattgatatagatgcagaggac agtgataatttcctggagagtacgattatcaaaccacctgtggtgcttccagaaatacca gtgctgaatattaccaatgcctctgtaaaatctggtgttacatccacagaatgggcagaa atgattgatgtttcccagccagtaccagaatttaaagaaaaaatcaaagatttggcccat gcttatccatttgaattggataacttccaaaaacaggcaattttaaaactagaagaaggc catcatgtgtttgtagcggctcacacttctgccggtaagaccgtagtcgctgaatatgca atcgctatgtctagaagaaattgtacaagagcaatatacacatcgccaataaaggctctg tcaaaccagaagtacaatgacttcaacaagacattcggtgaagttggtctattgactggg gaccttcaaataaacgcgacggcctcttgcctcgtcatgaccaccgagattctccgttct atgctctattgcggctctgacgtcacaagggatctagaatttgtgattttcgatgaggtc cactatatcaataatgctgagcggggctacgtatgggaggaagtgttgatattgcttccg gcccatgtcacaatagtgatgttaagtgcgactgtaccaaatacactccagttcgcggac tgggtcggtcggacgaagaaacgaaaggtctatgtagtgtccactcctaagcggccagtt cctttgtgccattacttgtatacgggatccggtggaaagtcaaagaacgagagatttcta gtcgtggaccaagaaagcaaattccaactgcggggatacaacgaggcggtcgccgcgaaa aagtccagggaaaatgattacaagaaaagctttggaccaaaaggtggcagacaattcggt aacccgaaagccgaacaaaccatgtgggtggccttgatagaccatctgcggtctcatgat aagttgcccgtcgtagccttcactttgtccagaaaccggtgcgaccataacgcggagaat ctcatgtcagtagacctaacaacggccaaagaaaaaggtcacattcgttccttcttccag aaatgtctgcagagactgaaagaaccggataggaaacttccacaggtaatcagactgcag cgtgttctcgagaacggaataggcgtgcatcacagcggcatattaccacttctcaaggag atcgtggaaatgctgttccaatcgggttatgtaaaaatattattcgcgaccgagacattc gcgatgggtgtgaatatgccagcccgtacggtcatattcgacgacgtcaccaagtttgac ggcctccagtcaaggagcttggttcctgcggagtacattcagatggcaggacgagccggt agacgaggtttggatgacacgggcacagtgataattctatgcaaggatggcgtaccagat caaatgacgctcaaggagatgatgcttgggacgcctcaaaagttgtcttcgcagtttcga ctcacctatgccatgatattgagtcttctgagagtggcaacagtgtccgttgagggtatg atgcagcgttcgttccgagaactgcaccaaatcctccaagccgataccaataagaaactc cttcagaaagcggaattggaatattcggaaaaatgcagttcccctctgactccacatttg gccccattggccacgttctacgacctctgtacggcctacgttgaggttttgggggaaatt atgcccttattgttatcgcagccgaaagttagtaaggagtttgtgccgggaagaattttg ctgctatcggctggaccctacatcaatcagctcgggatctatttgaatggaaatggtccc cgccagacgccatacaaggtgttagtgctaaacacagttgaggaagactcgaatcgatac aatttcgaccgcgacgaggcttggtaccgcatgttgagcttctcctcactgtacgaccat atcggtaccgaggaaagtacaaaagagcatacgatactttgcatcgctccgaagaacgta atcgccgtcactcggacctgtctcaagattgatggcaatatcatcattcaggattgggaa aaacgacaaatgccgaggttcaaagacgccccagtgggtgcaagctgcgcgagcgcagtg caagagctgtcgcgcttgagccacgcggctcgtactaaagtcactcccctggagactatc agcctcacgcaagccctcaatatctccactggcgaattgctccacgcgctcgataagatg aacaaactcaaggcgcaaatagaagctcaaaagaaaagcacagccatcgcgaacttcagg aacgaattcgcaatcgtatacgaaaggaagcaagcggaacggaaacgcgataaatacaaa cggcttttatcctacgaaagcctcgctctgtacccggactatcagagacgacttttggtc cttcgggagttgaattatatcgacgaacacgacagcgtcatcttaaaaggaagggtcgcg tgttgcatgggtaccaacgagctgattatagccgaattggtcttccgtaacgtcttcacg gataaaaatccagcagaaatagcggcgctgttgagctgtttcgtttttcaagcgaagacc catgtcgaacaggtgctgacggaaaagctggatgaagcggttaaagcgattcagcagatt gaggacgatctgtcgggtattgaggttaaatacggggtttcccaatttgagggccaacaa gagaggttgaacttcggtctcgtgagggttgtatacgaatgggcgttggagaaacccttc gctgaaatcatggatctcacggatgtacaagagggaattattgttagatgcattcagcag ttacacgagcttttagtagatgtaaaagacgcagcggtggccataggtgatccaaaattg caagcaaagatgatggaagcctccacagctatcaagagagatattgtatttgctgccagt ttatatacgacacaaaaagaagctcttaagacatga

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