Pieris brassicae (large cabbage white): 123716435
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Entry
123716435 CDS
T08632
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pbx
Pieris brassicae (large cabbage white)
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbx03021
]
123716435
03036 Chromosome and associated proteins [BR:
pbx03036
]
123716435
Transcription machinery [BR:
pbx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123716435
Chromosome and associated proteins [BR:
pbx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123716435
SLIK complex
123716435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
123716435
NCBI-ProteinID:
XP_045528143
LinkDB
All DBs
Position
11:6803797..6814404
Genome browser
AA seq
1810 aa
AA seq
DB search
MLLKGFMNESESESTSEKGEKTDSSGSGSGSESDSGSSSSGSASGANSGSEKSSNAGQSH
FSEDGKSSLKDSHANSSKSDHHTDKDSSDDSIRHKSRNNRDKIKSDLWEDNPDIYGVRRS
ARSRKEPDRLKLADSDSSDKGRSNGRRNRKKSDSWNSDTSDSDSDIKGSPPPPSKRPGQR
GVPLRKKKPTRRRFTSDEDESSELSDDAKSRTATRRTGAAVSYKEASDEQTDSSDLLEVD
NVEGDMEAEPEPEEHSETIEKILGIRRGKIGVTGNVTTVYYIEENGDPNKDCNPDDEETT
EPQYLIKWKGWSHIHNTWESEKSIMEQKVKGLKKLENYKKKESELAWWRKQAGPEDIDYF
ECQSELQQELVKSYNFVERIFAEQTRELEGGGTAHEYFCKWESLPYADATWEDSALIEKK
WPEKVQHFKAREAATTTPSRHCPVLRRRPKFHQVKEQPEYMGKDQTYILRDYQMDGLNWL
IHSWCKDNSVILADEMGLGKTIQTICFLYYLFKTQQLYGPFLCVVPLSTMTAWQREFTQW
APDVNVVTYIGDVSSRDIIRQFEWSFASSKRLKFNAILTTYEILLKDRQFLKTFSWACLL
VDEAHRLKNDDSLLYKALKEFDTNQRLLVTGTPLQNSLKELWALLHFIMPYKFESWEEFE
KDHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTK
NYSELRKGVKGSTNTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSGKL
LLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHF
NADGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIY
RLVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDASGTSANNPFNKEDLNAI
LKFGAEELFKDDDENDEDPVCDIDEILQRAETRDEGPAMAGDELLSAFKVASFAFDEEKA
VMGVKKDGGEEEGKDWDDIIPENVRKTLAEQAKTKKMEDLYLPPRRKTQQNNLNSSEGDR
KRRGRGGEADGADGADGDADADDTDVSDADVSADDDRPRKRGRPPASHREKIKGFTDQEI
RRFVKSYKKFSAPLKHLDSIACDAELQEKPLAELKKLGEILQDRCRSVLNDTADTSNDHS
DGRKNARKSFKLGGVSVNAKTMAACQNELAPLDEFLPETKEERLKWHLDFKTRPANFDVA
WGVEDDSKLLAGIYQYGLGSWEAIKMDSSFGIGDKILTNEDKKPQAKHLQSRADYLLKLI
KKLLDQKNGKQKQRKPRMKRGTKEPVTKDIVEDDVSSGDDHKKNNRAAKEKGKLKMEEVL
THDETSCERKEKDKKRSKKEGKDRTKNDKVKKNKKPAGPMHFTANNEPRALEVLGDLDPS
VFEECKEKMRPVKKALRALDNPDQTLSETEQVSRTRACLSQIGSQIDICLDAYPDPEKKV
EWRSNLWYFVSKFTNFDAKQLFRLYKYGLKKSDTKHKDGKHKENVKGNARNNINSNNHIK
SRKDGRNDENSERKEKRQRLEKSDKNNDKAAHASGVKRKLEEGECDPDPNDSKRHERHKH
KHKDRKCRDGSLKRDDLSHRERSRSERERERERDRDRERDRDRERDRDRERDRERSRTRR
DSGGGGPRVRQPYAHPHSDHPTHAHPPHSTHPAHPGWTPPAYPGPRQYRSDRNPRTHDKR
SRFGGYPPMGGPYSGYYDGATMPGSMGFPPVRPYPEDWRGGYAQPEYPYEDREYEREVYR
RDYDRRAPPT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgaagggctttatgaatgaatctgagagtgagtctacaagtgaaaagggtgag
aagacggactccagtggatctggatccggaagcgaaagtgacagtggctcaagttcatct
ggttcagcttcgggtgccaactctggatcagaaaaatcttcaaatgcagggcaatctcac
ttcagtgaggatggaaaatcatcactaaaagatagtcatgccaattcatctaaatctgat
caccacactgataaggattcatctgatgatagcattagacataaatcccgaaacaatcgt
gataaaataaagtcagatctttgggaggataaccctgacatttatggggtaagaagatct
gcaaggtctcgtaaagaaccggataggttaaaattggcagatagtgattcaagtgacaaa
ggaagaagtaatggtagaagaaatagaaagaagagcgattcctggaattctgatacctca
gatagtgatagtgatattaaagggtcaccacccccaccttccaaaagaccaggccaaaga
ggagtaccattaagaaaaaagaaaccaacgagaagaagatttactagtgatgaagatgaa
agtagtgaactttccgatgacgcaaagagtcgaacggccactcgtcgcacgggagctgct
gttagttataaagaagccagcgatgaacaaacagattcctcggatttgctggaagtggat
aatgttgagggcgatatggaagctgaacctgaacctgaagaacacagtgaaacaatagaa
aaaatacttggtattcgacgcggcaaaataggagtcacgggaaatgtgactacagtttac
tatatagaagaaaatggtgatccaaataaggattgcaatccagacgatgaagagactaca
gaaccacagtacctcattaaatggaagggatggtcccacatacataatacatgggaatct
gagaagtcgattatggaacagaaggttaaagggttaaaaaaattggaaaactataagaaa
aaagaatcagagttagcatggtggagaaaacaagctgggccagaagatattgattatttt
gaatgtcaatcagaactgcaacaagaattagtcaagtcttataattttgtagagaggata
tttgctgaacagactcgggagcttgagggaggtggaacagcacatgaatatttttgtaaa
tgggaatcacttccatatgctgatgcaacatgggaagattctgcacttatagaaaagaaa
tggcctgaaaaagttcagcattttaaggctagggaagcagcaacaacaaccccatctaga
cattgccctgttttgagacgaaggccaaaattccatcaagttaaagaacagccagaatac
atgggtaaagaccagacatatatattaagagattatcaaatggatgggttaaactggtta
atacattcctggtgtaaagacaattctgttattcttgccgatgaaatgggtttaggtaaa
actattcagacaatatgttttctgtattacttgttcaaaacacaacaattatatggacca
ttcctttgtgtagtaccattaagtacaatgactgcatggcaaagagagtttacgcagtgg
gcgcctgatgtgaatgttgttacctatattggagatgtttctagtagggatattatcaga
caatttgaatggagttttgctagttcaaaaaggctaaaattcaatgcaattttgacaaca
tatgaaattttactaaaagatagacaatttttaaaaactttcagttgggcttgcctgctt
gtagatgaagctcatagattaaaaaatgatgattcacttttgtacaaggcacttaaagag
tttgacacaaatcaaaggttactagtcacaggaacacctttacagaattcacttaaggaa
ttatgggctctactgcattttattatgccttacaaatttgaatcttgggaggaatttgaa
aaagatcatgaagatgctgcaacgaaaggctatgagaaactccacaaacaactagagcca
ttcatattaagaagacaaaaaaaagacgtcgaaaagtccctacccgctaaagtagaacaa
atattacgtgtagaaatgacgtcaatacaaaaacaatattacaagtggattcttacaaaa
aactacagtgaattacggaaaggcgtaaaaggttcaacaaacacatttatcaatattgta
atagagctgaaaaagtgttgcaatcatgctctcttgacgaaaccggaagattttgaatcg
cgggcttcacttgcgacaactgatgcagtcgagaaactattaagaggatctgggaaatta
ttattgctagataaattgctatgtaggcttaaagaaacaggtcatagggtattaattttt
tcacaaatggttagaatgttggatatactagcagaatatttgcaaaggagacattttcct
tttcaaagactggatggcagtataaaaggggagctaaggaagcaagctcttgaccatttt
aatgctgacggatctcaggacttttgttttttgctatcgactcgagcaggaggcttggga
attaatttggcaacagctgatactgtgataatatttgattcagattggaatcctcagaat
gacttacaagctcaagcaagagctcatcgaataggtcaaaaaaatcaggtcaacatttat
cggttagtaactgccaggtccgtcgaagaagatatcgtagagagggcaaaacgaaaaatg
gtactagatcatctcgtgatccagcgaatggacactactggtagaacggtccttaataaa
cgcgatgcgtccggtacaagtgctaataatccgttcaataaggaagacctcaatgctata
ttaaagtttggagccgaagaactgtttaaagatgatgatgaaaatgatgaagatccagtc
tgtgatattgatgaaatcttacaacgagctgaaacacgagatgaagggcctgctatggcg
ggagatgaattgctttctgcttttaaagtcgctagttttgcatttgatgaagaaaaggct
gtcatgggtgtgaaaaaagatggaggagaagaagaaggcaaagattgggatgatatcata
ccagaaaacgtccgtaagacgctagcggagcaagcgaaaaccaagaaaatggaggatcta
tatctaccgccacgtagaaaaacgcaacaaaacaatttgaacagctcagaaggtgatcgc
aagaggcgtggccggggtggggaagctgacggtgccgatggggcagacggagatgctgac
gccgatgatactgatgtttctgacgctgatgtcagcgctgatgatgaccgccctaggaaa
cgtggtcggccaccggccagtcacagagagaagatcaagggctttacggatcaggagata
agacgatttgtgaaaagttacaagaagttttcggcgccattgaaacatttagatagcata
gcttgcgatgcagaattacaagaaaaacctttagcggaattaaagaagttaggagaaatt
cttcaagacaggtgtagatcggttctcaatgacacagctgatacttcaaatgatcatagc
gatggccggaaaaatgcaagaaaatcgtttaaattgggcggcgtgtctgtaaacgccaag
acgatggcagcatgccaaaatgaactcgcgccattagatgaatttcttcccgaaactaaa
gaggaaagacttaagtggcatttagattttaaaacgcgaccggctaattttgatgtcgcc
tggggcgtagaggatgactctaaactacttgcaggcatttaccaatatggtttgggatcc
tgggaggctataaaaatggattcatcctttggtattggggataaaattttaacaaatgag
gataagaagccgcaagcaaagcatttacaatcgagagccgattatttacttaagctaatc
aaaaagttgcttgaccaaaagaatggtaaacagaagcaaagaaagccccgtatgaagcga
ggcactaaagagccagtcaccaaagacattgttgaagatgatgtcagttctggtgatgac
cataaaaaaaataacagggctgcaaaggaaaagggtaaactcaaaatggaagaagtatta
acacacgatgaaacctcgtgtgaacgaaaggaaaaagataagaaaaggtcaaagaaagag
ggtaaagataggacaaaaaacgacaaggtaaaaaagaataaaaaaccagccgggcctatg
cattttacggcaaataatgaaccgcgggctttagaagtattaggagatttagatccatca
gtctttgaagagtgtaaagaaaaaatgaggccagttaagaaagccttacgagcccttgac
aatccagatcaaactttatcagaaacagaacaagtatcgagaacaagagcatgtctttcg
caaataggaagtcaaatagatatctgtttagacgcttatcctgaccctgaaaagaaggtt
gagtggagaagtaatctctggtactttgtctccaagtttacaaactttgacgcaaagcag
ttgtttaggttatataagtatggtctcaagaaaagtgatacaaagcataaggatggaaaa
cacaaggaaaatgttaagggaaatgccagaaacaatattaattctaacaatcacataaaa
tcaagaaaagatggcagaaacgatgaaaattccgagcgaaaggagaaacgacagcggctc
gagaaatctgataaaaataatgataaagctgcacatgcttccggtgttaagagaaaattg
gaagagggtgaatgtgatcctgatccaaatgatagtaaaagacatgaaagacataagcac
aagcataaggatcgcaagtgtagggatggaagcctgaagcgagatgatttgtcccataga
gagcggagtcggagcgagcgggaacgagagcgggagagggatcgcgaccgggagcgggat
cgtgatcgagagagggaccgggatcgagaacgagatcgggaacggtcaagaacgaggcgg
gatagtggaggtggtggtccccgagtgcgacaaccctatgcgcatccgcattcggatcat
cccacacacgctcatccgcctcactccactcatcccgcacaccctggttggacgcctcca
gcctatccgggccccaggcagtaccggagcgatcgaaatcctagaacacacgataagaga
agcaggttcgggggttatcctcccatgggaggcccctacagtgggtactacgacggggcg
acgatgccgggcagcatgggattcccgcccgtgaggccatatcccgaagactggcggggg
ggctacgcccagccggagtacccctacgaggaccgggaatatgaacgggaggtctataga
cgagattacgatagacgtgccccacctacatag
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