Pieris brassicae (large cabbage white): 123717247
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Entry
123717247 CDS
T08632
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03018
RNA degradation
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123717247
09123 Folding, sorting and degradation
03018 RNA degradation
123717247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123717247
03041 Spliceosome [BR:
pbx03041
]
123717247
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123717247
mRNA degradation factors
5'-3' decay
Lsm complex
123717247
Spliceosome [BR:
pbx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123717247
Complex C
U2 snRNP components
123717247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
123717247
NCBI-ProteinID:
XP_045529099
LinkDB
All DBs
Position
12:7935761..7936222
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLSDISVIDPDKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATVSTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttactctttttttaagtctcttgtaggaaaagacgtagttgtagaattgaag
aatgatctaagtatctgcggaacattgcattcggtagaccagtatcttaacataaaattg
tcggatattagtgtgattgatcccgataagtatcctcatatgttatcagtcaagaattgc
tttatccgaggatctgtagttcgatatgtgcagctaccagcagatgaggtagatacccaa
cttttacaagacgcggccaggaaagaggcaacagtatcaacaagatga
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