Pieris brassicae (large cabbage white): 123717771
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Entry
123717771 CDS
T08632
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123717771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123717771
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123717771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
123717771
NCBI-ProteinID:
XP_045529905
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Position
13:5924693..5927012
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AA seq
680 aa
AA seq
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MARHRNIRNRSYSDDYDYEDVYGHSVEDDVCLSPSDAAQFIYDRSRNQHAISQFLESDDI
QEEPEIEVDVDNSRPSFERRESMDLRGLNLTEEDETKLMSCLDELRNVLGDTVSDTILIQ
AVIKHKFDYNKALDEILNNNKRDNIKVSTEKPKIVIDSAPIIPNLDKAPIISTSTLDKTI
LIASKPEENNIAVVKGFKINNDITYSRPQTPRDQSPAVTSRADNLDESKSTPKVKENKID
PTIKYSNERGSDKEHLYIVVIGHVDAGKSTLMGHLLCELGEVSQRTLHKYEQESKKIGKQ
SFMYAWVLDETGEERVRGITMDVGKAQFETKTKKVIILDAPGHADFIPNMITGAGQADVA
LLVVDATRGEFESGFELGGQTREHALLVRSLGVSQLAVAVNKLDTTNWSQERFNVIVKKL
KLFLKQAGYKDSDVTFVPCSGLTGDNLVKPSNEAELLNWYTGPTLLDVIDKFNVPERPVS
KPMRMSINDVYKGTGSGFCVAGRIENGIVNKGDKVLVCPSKEMAEVRNMAINELSTNIAF
AGDQVAITLAGVEMQNVSIGYILCDSVYQVPVTSRFEARLVVFNVKVPITKGYPVLLHHQ
SLIESAHIRKLKALLNKSTGEMIKKKPRCLGNNSVAVVDIEVCRPICIERYKDVKELGRV
MLRVAGVTIAAGLVTEIYTD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcatcgaaatataagaaatagaagttattcagacgattatgattacgaagac
gtttacggccactcggttgaagacgatgtttgtttatctccaagtgatgctgctcagttc
atatatgatcgttccagaaatcaacatgctatatcacaatttctggagtcggatgacatt
caggaagagccagaaattgaagtcgatgtcgataactctcggccatctttcgaacgtcgc
gaatccatggatttacgtggactaaatttgactgaagaggacgaaactaagctaatgtct
tgcttagatgaactacgaaacgttttgggagatacggtatcagatactattcttatacag
gcagtaataaaacataaatttgattacaataaagccctggatgaaattttaaataataat
aaacgggacaacatcaaagtttcgacagaaaagcccaaaatagtcattgactctgcccct
ataataccaaatcttgataaagctccaataatttcaacttctacattggataaaacaata
ttgattgcttctaaaccagaagagaataacatagcagttgtaaaaggttttaaaataaat
aatgatatcacatatagcagaccacagacacccagagaccaatcaccagctgtgacttct
agagctgacaacttagatgaatcaaaatcaactccaaaagtaaaggaaaacaaaattgat
ccaactattaaatactccaatgaacgaggatctgataaggagcatttatatattgttgtt
attggtcatgttgatgctggaaaatctaccctaatgggacacttactttgtgagcttggt
gaggtaagtcagagaaccttgcataaatatgaacaagaaagcaaaaaaattggaaagcag
agctttatgtatgcctgggtcttagatgagacaggtgaggagagagttagaggtatcaca
atggatgttggtaaagctcagtttgaaacaaaaacaaagaaagtaattattttagatgca
ccgggacatgcagattttattcctaatatgattactggggccggacaagcagatgtcgca
ttgttagttgtcgatgccactcgaggagaatttgagtcaggttttgaactgggaggacag
actcgtgaacatgcattgcttgttagatcattaggagtaagtcaattagctgtggctgtg
aacaaacttgatactaccaattggtcgcaggaaagattcaatgtaattgttaaaaagttg
aagttgtttttaaaacaagctggttacaaagactcagatgtgacatttgtcccgtgctca
gggctaactggagacaatctggtgaagccttcaaatgaagcagagttgcttaactggtat
actggacctactttactagatgtaatagataagtttaatgttccagagaggcctgtgtca
aagcccatgcgaatgtctattaatgatgtatataaaggaaccggttctgggttttgcgtt
gcaggccgtattgaaaatggtattgtaaataaaggcgataaagttttagtttgtccttca
aaagaaatggctgaagtcagaaatatggctataaatgaactgtcgactaacattgcgttt
gccggtgaccaagtggcaataacactagcaggggtagagatgcaaaatgtttctataggt
tacatactgtgtgattcggtctatcaggtaccagtgacttcacgatttgaagcaaggctt
gtggtttttaatgttaaggtgccgataactaagggatatcctgtattgctacaccaccag
tcactaatagaatcggcacatatcagaaaattgaaggcattattaaataaaagcaccgga
gaaatgataaagaaaaagcctagatgtttaggaaacaattcagtagcggtagtggatata
gaagtttgtcggcctatttgtattgagaggtataaggatgttaaggagttgggtcgtgtc
atgttacgcgtggcgggtgtcactatagcagcaggacttgtcacagagatttataccgat
tga
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