Pieris brassicae (large cabbage white): 123717834
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Entry
123717834 CDS
T08632
Name
(RefSeq) E3 ubiquitin-protein ligase hyd isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123717834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbx04121
]
123717834
Enzymes [BR:
pbx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123717834
Ubiquitin system [BR:
pbx04121
]
Ubiquitin ligases (E3)
HECT type E3
123717834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
PABP
zf-UBR
Grg1
Motif
Other DBs
NCBI-GeneID:
123717834
NCBI-ProteinID:
XP_045530017
EnsemblRapid:
ENSPBSG00000008399
LinkDB
All DBs
Position
13:complement(1974192..2036904)
Genome browser
AA seq
2839 aa
AA seq
DB search
MSSMHFVVHPLPGTEDQLIDRLREVTERWNRFGTGGGSPALSSLRGVRSVAAGPAHIACL
LEDGTICRAAFSIIPDRLDLSKADASKNNGNGGGGSGGGGNSGGKQGGSSSSCGSRQQPR
TRARIMRNSIRAAPSSQGSTSRATGVIIGASGSSRVVSAVPAPFVPEDLVTQAQVVLQGK
SRSLIIRELQRTNLDVNLAVNNLLSRDDEEGEEPENGEGGDGYVPEDLISLLDGGFHASQ
QDQSVIIDADAMFSEDIFGYAAIRSYINSRSGGGSAGRAGASREGSSAQDRTSEFSRWRE
RQYFGPRRWLETALRDNSWDKEGVESKKKDSAMAASPLWVSEDLEYWDTNIRFTHIAATY
SELIAVSTYGQIHQWRWADPHPYQRTDALGNGSYHPRSNWLGLAPGERVININAAGIRIS
ILTDAARIATFLDESIAHAPGATRLEHPLQAFTEFGSDKPISLHVCSLYTVAKLDSGALY
WWGVLPLGQRARLWEKHRARSRKQQRGHSSSAPQDLQAGQSVTMKNAPMYQPGAIGFNMS
TGVPKVGILQNAAWNLSDTCRFKLLPAPQPDRSISEKDKRDMQNQSPLTVSSVKASSSSS
SNKDTAKDSNKDMADRLDMPPPPSPASSTCSDTSTSHKRAKRVTVRGEEGSSNDGTKRDE
EEWPLKEVVFLEDVKSVPLGRVLKVDGAYAAVRFPSVGKDGKEIVPTPDDWTTLLQDCRL
VRKDDLVAVKWGTGGAAGPRGPDCLQRLPRKISLPPELQVITIAVDNRGVHAVVRRPGGA
LAYAVYAVGTTRALTDSVFPTDHTALLGHSNGHSIQLTTAAEGSEPVVMMLDGNNALYPI
ARDCVGMVREPPPLNLAPARAITAHALPLHPHGAAHSSHAPLKSQVALIIIVPEPQLMMP
RVLRCDLDGLRQLLHQLETDNNKQQILSILQERCDGNRNILHACVHMCSPTSNKEPDIVD
NPSVPTIPNPSSATNNEEAVPALSWPPETFEASGDEDSLMGISNNKMSNSGNGTVSADPV
ERRGNALSALRALCESTALQPYLLQLLTAKDGMGQTPLMAAVAERAYRAALAILDAIRAC
DADEAQRSAAIFPPNAHPDHSPLLVLCCNDTCSFTWTGQDHINQDIFECKTCGLTGSLCC
CTECAKVCHKGHDCKLKRTSPTAYCDCWEKCRCKALVGGSWTARCDLLARLARETQLATH
FNSRGESILLFLVQTVGRQAVEQRQFRAGSGRARAPRKQPGSDAELDVPDHDLEPPRFAR
RALVHLLGDWAAVEAAVMCGSSTSEEASTSHQQSGTTLLDKFTHALIVKCTNEMLDTLLH
TLIREQKNDTIPGRAERAREVTRRFVRSVARIFVIFSVEMAPGASKKKGPVSITSSLVRC
RRVFAALVALAVEELVEAADALLAPVRLGVVRPTAPFPLATTYVDLVNGSEDLFGVEPLS
TGHPRSSRRESANNSNRATATGGTSIGSSTLVRSSTPVATEYADDVAGEALGGDDDASET
DEPTAATQQQDTQHDDPMGDRGAEHVVVENGTERAEGGESESELDMLAEVETESDSDDQD
NAESAQRSVQTGATQGSDAALYDAGIASLLLYPEEESGDSTQPEDEDSEAGETDEQEGES
EPQLHDGETLERRAAPPTRTNLAPHSMQWAIRSREALRGGSSGTSGVRLTGASSLVFIDP
ASLRRSAGVAAAGAHDPHSTSTTAAFLARAFGIVIRQIADLLWEYERAPLPLTRMLPFAY
TDALRLQCYLERQLKPTWDWLVTVMDATEAQLRFGASLTSNNASTSTAEPSRAAAPTTRR
ATTFTTPATRIIGFSEAPRVRDRDQGVEAGSARREFLAYCLSLLRAHSAEHAEQLPVLDV
AALKHVAYVLDALVYYMRAAQPQPHHHHHLWTPDENENEEGEEEMVVGGSTAAESDNEGE
NGRGRQHSFFQRTDSTLCLGCPPPDPFNMTMQDALPLADQPQLLQPNARREELFGMPRQP
VTVPPSGDGPPGTNNPLEVVPRRLGLSSRGPERGASPPARPASAPPAHTHTHILSRDEPQ
DLSCAKDTASKMDMDTDGEYISDSDSNEARQITRKKHHRHPHMSSSNQMHDSNSSSSEFH
TLVNTACSIMEGPHQQGLSISPSPGPSGLNTAPEPRASSSRSPGKSVIVRASRERQGELL
SVADPLESQEISAHVTVETTGLPPPPPLPQPNAPAQPRACPSLGASVSHDLLLGRWRLSL
DLFGRVFTEDVGLEPGSVVSELGGFPVKEVKFRRDMEKLRTSAQKDLTLHKMERERTKLL
QQTFAELNSAFAGQNRRALGALPQLTVNRVKVTFRDEPGEGSGVARSFYTSVAEALLANE
KLPPFEPKTGNVTNNSAANGTSGSASGAASGASTNSGARSSSGASRARTKDTARRGAARP
ASRPSSREPRRVLSVDARPYSPQGAPGGESASYSGERSSGHNEHLTVHQAQLGERLYPKV
HSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMHPSEAILDLDVFSL
SERGAGAALNPTSALSAPDDAAPLFYSPGKRGYYSPRQGRATPERINAFRNVGRIIGLCL
LQNELCPMFLNRHVLKYILGRKIRFHDLAFFDPVVYESLRQLVVDAETGDSHTLFAALDL
NFSLEMCEEEGGGCVELLPGGREIEVTALNVYDYVRKYAQHRMVISQEKALEAMRVGVLD
VLPESALEGLTAEDLRLLLNGVGDINVAALVSYTGFNDESGEPPERLARFKRWLWAIVDK
MTHLERQDLVYFWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSR
HVLKHKLLLAIKTKNFGFV
NT seq
8520 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatgcatttcgttgttcatcccttacctgggacagaggatcaactaatagat
cgtttgcgagaagttactgagagatggaatagatttggtactggaggtggatcacctgca
cttagttccttgcgaggagtgcgctccgttgctgctggaccagctcatattgcctgcctt
cttgaggatgggacaatctgtagagctgcattttcaatcatacctgacagattggatttg
agtaaagcagacgcaagcaaaaataatggaaatggcggtggtggaagtggcggaggtggg
aatagtggagggaaacagggcggaagcagcagtagctgtggttccagacaacaaccacgc
accagagcaagaattatgaggaactccattagagctgccccaagctctcaagggtcaaca
agtcgtgcaaccggggttattataggcgcatcgggatctagccgtgttgtgtcagcagtg
cctgccccctttgttcccgaagaccttgtgacacaggctcaagtggtcctacaaggaaag
agtagaagtctcataattcgtgaattacagagaacaaatctggacgtgaacctggcagtg
aacaacctgctgtcccgtgacgacgaagaaggcgaagagccggagaacggcgagggaggc
gacggctacgtgcccgaggacctcatctccctgctcgacggcgggttccacgccagccag
caggaccagtcggtgatcatcgatgctgatgcgatgttctctgaggacatcttcgggtac
gcggctatcagaagttatattaacagccgcagtgggggcggcagcgctggaagggctggt
gcttcccgggaaggaagttcggcccaggatagaacctcggagttcagccgctggagggag
aggcagtactttggacctcggcgttggcttgagaccgcattacgggataattcctgggat
aaggaaggagttgaaagtaagaagaaagactcagcaatggcagcatctcctctctgggta
tccgaagatctggagtactgggacactaacatccgtttcacccatatagcggcaacctac
agtgaattgattgctgtctccacatatggacagattcaccaatggcgctgggccgaccca
cacccataccagaggactgacgctctgggcaatgggtcctaccaccctcgtagtaactgg
ctcggtttagctccaggcgaaagagtcataaacattaacgccgccggcattaggatctcg
attttgacagacgcagcacgtatagcaacgtttttggacgagtctattgctcacgcaccc
ggcgctacacgcttagagcatccgctccaagcgttcaccgagtttggctcagacaagccg
atttcgcttcacgtgtgttccttatatacagtggccaaattggattctggagccctctat
tggtggggcgtattacctttgggtcaaagagcacgcctatgggagaagcaccgtgcgcgt
tcccgtaagcagcagcgcggacattcctcttccgcgccgcaggatttacaggctggccaa
agtgttaccatgaagaatgctcctatgtatcaaccaggagctatcggattcaacatgtca
accggagttccgaaagttggtatcctccaaaatgcggcctggaatttatcagacacgtgt
cggtttaaactgctgccggcgcctcagcctgatcgatccatttctgaaaaggataagagg
gatatgcagaatcaatcaccattaacggtatcgtctgtgaaggcgtcatcatcgagcagc
tcaaacaaagacactgctaaggacagcaacaaagacatggcagatcgcttggacatgcct
ccaccgcccagtcctgcttcatcgacctgcagtgatactagtacatcccacaagcgggca
aagcgcgtcacggtccgcggcgaggaaggttcatccaacgatgggaccaaacgcgacgaa
gaggaatggcccctcaaagaagtggtgttcctcgaagatgtgaaaagcgttccactcgga
cgggttttaaaggtcgacggcgcatacgcggctgtcagattcccgtcagttggcaaagat
ggaaaggaaattgttccaacgcccgatgattggacgacgctgctgcaggactgtcgttta
gtaaggaaagatgacttggtcgctgtgaagtggggaaccggaggggctgccggtccacgt
ggcccggattgtcttcagcgtttgccaagaaagatctcgttacctcccgaattgcaagtt
attactattgcggtggacaatcgtggcgtacacgccgttgtacgtagacctggcggtgcg
ttagcgtacgcggtttatgctgtgggaactacgcgagccctcacagacagtgtattcccg
acggaccacacagctctattgggacactcaaatggacattctatacagctcactaccgcg
gcggaaggtagcgaaccagtagtgatgatgctagatggcaacaacgccctttaccccata
gcgcgtgactgcgtgggaatggttcgtgaaccgccgccattgaaccttgcgcccgctcga
gcgatcactgcgcacgcgttgcctctgcatccacacggcgcagctcattcctctcacgcg
ccgcttaagtcccaggttgcactaataataatagtccctgagcctcaactgatgatgccg
cgagtgctgcgctgtgatcttgatggacttcggcagttgttgcatcaactcgaaactgat
aataacaagcaacaaatattatcaattcttcaagagcgttgtgatggtaatagaaatatt
ttacacgcgtgcgtacatatgtgttcgcctacgtcgaacaaggagccggatatagtagat
aatccatcagtgcctacaattcctaacccatcgagcgcaactaacaatgaagaagctgtg
cccgctttgtcctggcctccggagacctttgaagcgtcgggtgatgaagacagcttgatg
ggaatctccaataacaaaatgtcgaatagcggcaacggaactgtgagcgcggatccagtt
gagaggcgtggcaacgcgctttccgccttgagggccctctgcgagagtaccgccttgcaa
ccttatctgttgcaacttctaactgccaaggatggcatgggtcaaacacctctaatggct
gcagtagcggaacgagcgtaccgagcggccttagccatattggacgcaatacgtgcgtgt
gacgctgacgaagctcaacggtcggcagccattttcccccccaacgcccatccagatcat
tcgccgttgttggtgctctgctgcaatgatacatgcagcttcacgtggaccggacaggat
cacattaatcaggacattttcgaatgcaaaacatgtggtctcaccgggtcactgtgttgc
tgtactgaatgtgctaaggtgtgccacaagggccatgattgtaaactgaaacgtacgtct
ccgactgcgtactgcgattgttgggagaagtgtcgctgcaaggcgttggtgggcggtagt
tggaccgcgcgttgcgatctactggccaggctcgccagggagacacaattggctacacac
tttaactctagaggcgaatcgatccttctgttcctggtacaaacggtgggtcgtcaagcc
gtggaacagcgtcagttccgtgctggaagtggtcgcgcccgtgcgccacggaaacagcca
ggctctgatgctgagctggacgtgccggaccacgacttggagccaccgagattcgctaga
agggcactggtacatttgttgggtgattgggctgctgtagaagcggccgtgatgtgcggc
tcgagcacaagcgaagaagcgtcgacttctcaccagcagtctggcactacgctattggac
aagttcacccatgcgctgatagtcaagtgcacaaatgagatgttggatacgctcctacac
acattgataagagagcagaagaacgacacgatacccggacgtgcggaacgagctcgtgaa
gtgacgcgacggttcgtgcgttcggtcgcgaggatatttgttatattcagcgtggaaatg
gctccaggggcctcgaagaaaaaggggccagtttcgatcacctcgtctctggtgcgttgc
cggcgcgtcttcgccgctctggtggcgttagccgtcgaggagctggttgaagcagccgac
gccctattggctccagtgcgacttggggtcgtccgccccaccgccccgttcccgttggcc
actacgtacgtggatttggtcaacggcagcgaagatttgtttggtgtggagccgctgtcg
actggacatcctcggtcgtcgcgaagagaatcagcaaacaacagcaatcgtgcaacagca
acaggcggtacgtctatcggcagttcgaccctcgtgcgctcgtctacgcccgtagcgacg
gaatacgcggacgacgtggcaggtgaagcgttaggaggagacgatgatgcgtcggaaact
gatgaaccaacggcagcaacacagcagcaggatacacagcacgatgatcctatgggtgac
aggggagctgaacatgtggtggtcgaaaatggaacagagagagctgagggtggggagagt
gagagtgaactggatatgctcgctgaggtggagactgagagtgattcagatgatcaagat
aatgcagaatcggcccaacgcagcgtgcagactggcgccacgcaaggttcggatgccgcg
ttatacgacgcaggaatagcgtcgctgttattatatccagaggaggaaagtggagattcc
actcagccggaagacgaagactcggaggctggggaaacggacgagcaggagggggagtcg
gaacctcagcttcacgatggagagaccctcgagagacgggcagcaccgccaactaggacc
aatctagcgccgcactctatgcagtgggcaatacggtctcgcgaagccctgcgcggcgga
agtagcggaacgagcggggtaaggctgacgggtgcctcttctttggtcttcatagacccg
gcgtctttgcgccgctcggccggagtggcagctgcaggagctcacgatccgcattcaact
tccaccacggccgcttttcttgccagggcttttggtatcgttattcgacaaattgcggat
cttctatgggaatacgagcgcgccccattgccgctcacgcgtatgctgccgttcgcctat
actgatgcattgcgtcttcagtgttacttggagagacaattgaagcccacctgggattgg
cttgtcacggttatggacgccactgaggctcaacttagattcggagcatcattaacctca
aacaatgcaagtacatccacagcggagcccagtagagcggccgctccaaccactcgcaga
gcgactacttttacgacacccgctacaagaattattggtttctctgaagcgccacgggtt
agggatcgtgatcaaggcgtggaagccggtagcgcgagacgggagttcctcgcatactgt
ttgtccctcctgcgcgcacatagcgctgagcacgcggaacaactgcccgtgctggacgtg
gccgcgctcaagcacgtcgcgtacgtgctcgacgccctcgtctattacatgagagccgct
cagccgcagccgcatcatcatcaccatttgtggacaccggatgaaaatgaaaacgaggag
ggtgaagaagaaatggtagtaggtggcagcactgcggcagaatctgacaacgagggggag
aatggccgagggaggcaacactcgttcttccagagaactgattccacgctttgcctgggc
tgtccgccgcccgatccatttaatatgacaatgcaagacgccctgccattggctgatcag
ccccaactattgcaacctaacgctagacgcgaagagctctttggaatgccgcgacaaccc
gtcactgtgcctccctctggggatggaccaccggggacaaataacccacttgaagtcgtg
cctcgtcgtctagggctctccagccgtggcccggaacgtggagcttcgcctccagcccgc
cccgcttcggctcctcctgcgcatacgcacacgcacatactgtccagagacgaaccacag
gatctgtcgtgtgccaaagatacagcctcaaaaatggacatggatacggacggcgaatat
atatcggattctgactcgaatgaagcgagacaaatcacaaggaaaaaacatcatcggcac
ccacacatgtccagtagcaatcaaatgcacgactcgaactcgtcaagctcagagttccat
acgctagtgaatacggcttgctccatcatggaaggaccacatcagcaggggcttagcatt
tcaccatctccaggtccaagtggtctcaatacagcgccggagccgcgcgcctcatcatca
agaagtccaggaaaatccgttattgtacgtgctagccgcgaacgtcaaggggagttgttg
agtgtggccgacccgctggaatcgcaagagatctctgcgcacgtgacggttgaaactact
ggcttgccccctccaccgcctctgccgcagcccaacgcaccagcgcagccgcgcgcgtgt
ccatccctcggtgcgtcagtttcgcacgacctgttgttgggcaggtggcgtctgtcgctt
gacctattcggacgtgtgttcactgaagatgtggggttggagccgggatccgtggtatct
gaactcggtggattccccgtcaaagaggtgaagttccgcagagatatggagaagctgagg
acatcggcgcagaaggatttgacactgcataagatggaacgcgaacgtacgaaattactg
caacaaacgttcgcggaactaaacagtgcgtttgcgggacaaaatcgtcgcgctctcggc
gctttgccgcaactcacggttaatcgagtcaaggtcacattcagagatgaacctggagaa
ggcagcggtgtggccaggtctttctatacgagtgtagctgaggctcttctagcgaatgag
aagctaccgccctttgagcccaaaacaggcaacgtgaccaataatagtgctgcaaacggc
acgtctggatccgcgagtggtgcggctagtggggctagcactaatagtggagctcgcagc
agtagtggcgcaagtcgtgcccgaacgaaagacacggccaggcgtggagcagccagacca
gcttccaggccttcgtcacgggaaccaaggagggtgctcagcgttgatgcacggccttat
tcgccacagggcgctcctgggggtgagagcgcgagctacagcggcgaaagatcgagcgga
cacaacgaacacctcaccgtacatcaggctcagttaggcgagagactgtatccaaaggtt
cattccctacacccaacgttcgcgggcaagattacggggatgctgttagagctgacgcct
gctcagttgctcgtgttgctcgcaagtgaagacgcgctcaggcaaaaggttcgggaggcc
atggatctcatcgttatgcacccatcagaggcgatactcgatctcgatgtattctctcta
tcggagcgtggcgcgggcgcagccctaaaccctacgagcgccctctcggccccggacgac
gcagcaccgctgttctactcccctggcaagagagggtattattcccctcgccagggtaga
gctacgccagagaggattaacgcttttagaaatgttggaagaataataggcctatgcctc
ctgcaaaacgagctatgtccaatgttcctgaaccgtcacgtcctaaaatatatcctgggt
agaaagatacgcttccacgatcttgctttcttcgatccagtggtctacgagagtttgagg
cagctcgtggttgacgcggaaactggcgactctcatacgctttttgcggcgcttgatctc
aattttagccttgaaatgtgcgaagaagagggcggtggctgcgtagagttattgcccggt
ggacgagagatcgaggtgaccgcgttgaacgtatacgactacgtgcggaagtacgcgcaa
catcgcatggtcatctctcaggagaaggctttagaggctatgcgagtgggagtcctggac
gtgctgcccgagtcggccctagaaggcctaaccgcggaggacctgaggctcttgctgaac
ggtgttggcgatatcaacgtggcagcgctcgtgtcgtacacgggcttcaatgacgagagc
ggggaacccccggaacgactcgccagattcaaacgctggctctgggctatagttgataag
atgacgcatttggaaaggcaggatttggtgtacttttggaccggatcgccagctctgccc
gcatcagaggaaggcttccagccgatgccttcagtgacaatcagaccagccgacgacgcg
cacctgcccacggccaacacctgcatctcccgactctacatacctctgtattcctcgcga
cacgttctcaaacataaacttttgctcgcaattaaaactaaaaactttggcttcgtctag
DBGET
integrated database retrieval system
