Pieris brassicae (large cabbage white): 123718027
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Entry
123718027 CDS
T08632
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123718027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123718027
03009 Ribosome biogenesis [BR:
pbx03009
]
123718027
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123718027
Spliceosome [BR:
pbx03041
]
Complex A
U2 snRNP components
U2 related factors
123718027
Complex B
123718027
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123718027
Ribosome biogenesis [BR:
pbx03009
]
Eukaryotic type
90S particles
Helicases
123718027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
ABC_tran
Flavi_DEAD
T2SSE
AAA_25
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
123718027
NCBI-ProteinID:
XP_045530334
EnsemblRapid:
ENSPBSG00000004366
LinkDB
All DBs
Position
14:5410262..5421041
Genome browser
AA seq
735 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREEKAAAAAKSGASGEGSSDTVANLGTALSSTSSAPGINSYTGL
PHSPRYHELLQKRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWCVEFACVT
ASKSKGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGML
LREAMSDPMLDQYRVILLDEAHERTLATDILMGVLKEVIKQRPDLKLVIMSATLDAGKFQ
QYFDNAPLMNVPGRTHPVEIFYTPQPERDYLQAAIRTVIQIHLCEEVAGDILLFLTGQEE
IEDACKRIKREVDNLGPDAGELKCIPLYSTLPPNLQQRIFEPAPPNRPNGAIGRKVVVST
NIAETSLTIDGVVFVIDPGFAKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKC
FRLYTETAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE
LLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFV
RPNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVR
QQLSRIMDRFNLKRTSTEFASKDYYINIRKALVNGFFMQVAHLERSGHYLTVKDNQIVQL
HPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLRIAPQYYELNNFPVCEARRQLE
LLQERLDSKSYQEGF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacggaggattgaagtaatggacccttttattaaaaagaaacgcgaggaaaaa
gcagcggctgctgctaaatccggcgccagtggagaagggtcctcagacaccgtggctaac
ctaggaacagctctatctagcacctcaagcgcgcctgggattaattcatatactggtcta
ccacactccccacgctaccatgaactattgcaaaaacgactgggtctccctgtatgggag
tacaaaaatgatttcatgcgtcttcttaatacacatcaatgtgttgtgcttgttggagaa
acaggatctggtaaaactacacaaattcctcagtggtgtgtggaatttgcttgtgttact
gcaagtaagtccaaaggtgttgcctgtactcagccaagaagagtagcagccatgtcggtg
gctcaaagagtggctgaagaaatggatgtagcattaggacagcaagttggttacagtatc
cgttttgaagactgttcaggaccacagacagtattaaaatacatgacagatggtatgttg
cttcgtgaggcaatgtcggacccaatgctggatcaatacagagtaattttacttgacgaa
gctcatgaaagaacattagcaacagatattctaatgggtgtcttgaaagaggttataaaa
cagagaccagacttgaaactagttattatgtctgctacgctagatgctggcaaatttcaa
cagtactttgataatgcaccactaatgaatgtaccgggacgaacacatcctgtagaaatc
ttctatacacctcagcctgaacgcgactacttacaggcggccatacgtactgtgatacaa
atacacttatgtgaagaagttgcaggtgatattctcctgtttttgactggtcaagaagaa
attgaggatgcttgtaagaggatcaaacgggaggttgacaacttgggtccagatgcaggt
gaactaaagtgcattccattatattccactctgcccccaaatctccaacagagaattttc
gagccagcacccccaaaccgtcccaacggtgctattggaaggaaagtagttgtatctaca
aacatagctgaaacctctttaacgatagatggtgtagtgtttgtgatagatcctggtttt
gctaagcagaaagtgtataacccaagggtccgtgtagagtctttactggtgtcaccaatc
agtaaggcttctgcccagcagcgcgccggtcgtgccggtagaactcgtcccggaaagtgc
ttcaggttgtacacagagacagcctataagaacgaaatgcaggacaacacatacccagag
attttgagatcaaacttagggtctgtagttttgcagttgaaaaagttggggattgatgac
ctcgtgcactttgacttcatggacccaccagcccccgagacgcttatgagggccttggag
ctgcttaactatcttgctgccctggatgatgacggaaacctaacagatttgggtgcggtg
atggcagagtttcctttagacccgcagttggcgaagatgttgattgctagctgcaaccac
aattgctccaatgagattttgtctatcacagctatgttgtcagtgccccagtgctttgtt
cgaccaaatgaggcgaggaaagccgcagacgaggccaagatgcgtttcgctcacattgat
ggagaccacctcacgttgctcaatgtttatcatgcatttaaacagaacatggaggaccct
cactggtgctacgacaacttcatcaactacagatcactcaagtctggagacaatgttaga
caacagttaagcagaattatggatagatttaatttgaagaggacaagtacggagttcgcg
agtaaagattactacattaatataaggaaagcacttgtcaatggattctttatgcaggta
gctcacctggagcggagcggccattacctaacagtgaaggacaatcagattgtccagctc
catccctcgacctgcttggaccacaaaccggactgggttatttataatgaattcgtgttg
acgaccaagaattacatacgcaccgttactgatattaaacctgaatggcttctacgcatt
gccccacagtactacgaactaaataacttcccagtgtgcgaggcgagacggcagctggag
ctcctgcaggagcgtctcgactccaagtcctaccaggagggcttctaa
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integrated database retrieval system
