Pieris brassicae (large cabbage white): 123718165
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Entry
123718165 CDS
T08632
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123718165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123718165
Spliceosome [BR:
pbx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123718165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_RFWD3
WD_LRWD1
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
123718165
NCBI-ProteinID:
XP_045530543
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Position
14:1111382..1127179
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AA seq
531 aa
AA seq
DB search
MSDDDDVILVKKPKTLYYGSLEEQEKARLAALAAAVKEGVEDGDAKELGDIQISNEYMEL
EEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGESVCLFGEGPAERRVRLRD
LLSYLGEDAINKKLEEEEARIERDRGREGTWYHEGPPELRESRLWIARYSLPRAKERLMK
AREELKLSGSIRAAAKQESQRRASAMTIYCSQIGDARPISFCRFSNDSQMLITSSWSGLI
KVWSVPDCKLLQTLTGHTCNVSSAVFHPDAAVPHHFTRMIDKESDQQNSMDIGEEVSRSV
TMASSSYDGNVHLWNFASDKPMASLEGHSPSRVARVEFHPSGRFLAATVFDHSWRLWDLE
TATEVLHQEGHAKPVYSVAFQGDGSLAATGGMDAFGRVWDLRTGRCVMFLEGHLGAVLGA
TWSPAGHHLATAAADHQAKIWDLRRRACLYTIPSHTHLISDIRYQRSHGHFLLTSSYDKT
AKLWSNPAWHPLKTLSGHDNKVMSVDISLDNKYIATSSYDRTFKLWAPDLV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgatgatgttattctggtaaaaaaaccgaagactctttactatggatcg
ctggaagagcaagaaaaggcacggttggctgcactggcagcagccgtcaaagaaggtgtt
gaagatggtgatgctaaagagttgggagatatacagatatccaatgaatacatggagctt
gaagaagaaatgtcaagggacaaaaaagctctgcttgaagagtttgagagaagacgtaag
gctagacagttaaatgtctcaacagatgatgatgaggtccgaagaagtttgaggcagctg
ggtgaatcagtttgcttgtttggtgaaggcccagcagaaagacgtgtaagattgagggat
ttactaagctatcttggagaagatgccataaacaagaagttagaagaagaagaagcgaga
atagaaagggacagaggaagagaaggcacttggtaccatgagggaccgccggagttaaga
gaatctagactctggattgcaagatattcattgcctagagcaaaagaaagactaatgaaa
gcaagagaagagttaaaattaagtggcagtataagagcggctgcgaaacaggagtcccag
aggcgggcatcagctatgacgatttattgcagtcagattggagacgctcggccgataagt
ttctgccgcttcagcaacgatagtcaaatgttaataacttcaagttggtctggtttaatc
aaagtatggtctgtgcctgattgcaaattactacaaacgctcacagggcatacgtgtaat
gtcagttcggccgtctttcaccctgatgcagctgtaccacatcactttacgcgcatgata
gataaagaatcggatcagcagaactcgatggatataggcgaggaggtgtcaagaagcgtc
acgatggcatcgtcatcctatgatgggaatgtacacttatggaatttcgccagtgataag
ccaatggcatcgttggaaggtcattctccatcacgcgtggctagagtggagttccatcca
tccgggagattccttgctgcaactgtcttcgaccactcatggagattatgggatttggag
actgcaactgaggtgttacatcaagaaggtcacgcgaagccagtgtatagcgtggccttt
cagggcgacggctcgctggctgctacaggaggtatggacgcgttcggtcgcgtttgggac
ctacggacaggtcgctgcgtgatgttcctcgaaggccacctgggcgcagtcttaggggcc
acctggtccccggccggacaccacttggctacagcggccgctgatcatcaggctaaaatt
tgggatcttagacgccgagcctgtctttacacgataccttcacatacgcatcttataagt
gatataagatatcaacgcagccatggacatttcctactgacgtcatcgtatgataaaacg
gcaaagttgtggtcgaatcccgcttggcatcctctgaagacactgtcgggtcacgataat
aaggtgatgagtgtggacatttcattggataataaatatattgcaacaagctcctacgac
agaacgttcaagctgtgggccccggatttagtttaa
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