KEGG   Pieris brassicae (large cabbage white): 123719863
Entry
123719863         CDS       T08632                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
pbx  Pieris brassicae (large cabbage white)
Pathway
pbx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pbx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123719863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbx03019]
    123719863
Enzymes [BR:pbx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     123719863
Messenger RNA biogenesis [BR:pbx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     123719863
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 CbiA MMR_HSR1 AAA_21 AAA_25 AAA_10 RsgA_GTPase AAA_24 AAA_16
Other DBs
NCBI-GeneID: 123719863
NCBI-ProteinID: XP_045532184
LinkDB
Position
2:1176829..1182447
AA seq 420 aa
MTEVQLQEFKLEPDSELRFEVESKNEKVVLEVKSGYAELFGTELVKNKPYEFHTGAKVAV
FTWHGCTVELRGRTEVSYVAKETPMVVYLNVHAALEQQRVAAEQDSTRGPVTMVVGPGDV
GKSTLTRILLNYAVRMARRPIYVDLDVGQGQISVPGTIGALLVERPASIEEGFSQQAPLV
YHFGHKSPDENLELYNTIVSRLAEVIAERCEHNKKASTSGVIINTCGWVKGAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSTSQRAEIRDSRIREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGMRAEEALTKLVPVWASPALAHRL
LAVSFSPAADELALHSNLAGFVCVTAVDSERQTMTILSPQPRPLPNTILLLSELQYMDNH
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgacagaagttcagttacaagagttcaaacttgaaccagattctgaacttcgttttgaa
gtagaatcgaaaaacgaaaaagttgttttagaggttaagagcggttatgcagagttgttt
ggaacagaactagttaaaaacaagccatatgagtttcatactggagctaaagtagctgtt
tttacgtggcatggttgtactgtggagctccggggtcggactgaagtcagttatgttgct
aaggagacacctatggttgtttacttaaatgttcatgctgcattagagcagcagcgtgta
gctgcagaacaagatagcacaaggggtccagttacaatggtagtaggtcccggggatgtc
ggaaaatctaccttaacaaggatattgcttaattacgctgtaaggatggcacggagacca
atatatgttgatcttgatgttggtcagggtcaaattagtgtaccaggaactattggagcc
ttactggttgaaaggccagcatctattgaagaaggttttagccaacaagcacctctagta
tatcactttggtcataaaagtcctgatgagaatttagagttgtataacactattgtctct
cggcttgctgaagttatagctgaaaggtgtgaacataataaaaaagcatcaacttcagga
gtaataattaacacatgtggctgggtgaaaggcgctggctacaaagtactgactcatgct
gcccaagcatttgaggtggatgtaatactagtattagataatgaacggttatacaatgaa
ttaaagagggatatgccgaagtttgtcaaagttgtgtatttaccaaaaagtggtggggta
gtggaaagatcaacatctcaacgcgccgaaataagggatagtcgaattcgggagtatttc
tatgggaaacgaaccccatactacccacattcgtttgacgtaaagttttcagatcttaaa
atttacaaggttggggccccgtcacttccggactcgtgtatgcctctgggaatgcgcgca
gaagaagctctaactaagttagtgcctgtttgggcttcacctgcgcttgcgcatcgctta
ctcgcagtgtctttctcaccagcagccgatgaattggcattgcattcgaacctcgcggga
tttgtgtgtgttactgcagtggattcggagagacaaacaatgacaatactgtcaccacag
ccaaggccacttcccaatacgatattattactttcggaactacaatatatggataatcat
taa

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