KEGG   Pieris brassicae (large cabbage white): 123720064
Entry
123720064         CDS       T08632                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
pbx  Pieris brassicae (large cabbage white)
Pathway
pbx03013  Nucleocytoplasmic transport
pbx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123720064
  09122 Translation
   03013 Nucleocytoplasmic transport
    123720064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbx03019]
    123720064
   03041 Spliceosome [BR:pbx03041]
    123720064
Messenger RNA biogenesis [BR:pbx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123720064
Spliceosome [BR:pbx03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123720064
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_NOL10_N NBCH_WD40 Beta-prop_EML_2 DSE1_N Beta-prop_WDR3_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_ACSF4 Beta-prop_WDR41 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 TRM82_WD Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 EIF3I WD40_Gbeta BBS2_Mid
Other DBs
NCBI-GeneID: 123720064
NCBI-ProteinID: XP_045532472
LinkDB
Position
2:complement(8478521..8480676)
AA seq 325 aa
MLDKILYNTVLCQSFSPCGKYLVAGNIYSQLAVFDLDCIFNPNPELLSPDYNKAKQIHTL
DSGKQICSLVSTKKFLIAGTVNEIYGWEWKSILNVKLSKPAWTVRIKSESIIHQCDINGL
WLSDNEERLYAGCGDNKVYEINLEDGSLVQTLSGHDNFVHCVHGNNKQLISAGEDGLVVL
WDLRTSKWQNKIEPYKNSKVARPDVGKWVGAASLGDDWLVCGGGPRLALWHLRSLDAVTV
FDIPDHGIHVASFLDDCVLAGGTAQHLYQLSYSGEVRVELPVSSTSVYSAIVRTSPNKVI
SIAGSSMDIDLCTSFNYRDQVLHFR
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcttgacaaaatcttatacaatactgtattatgccaaagtttctcaccttgcggaaaa
tatttagtagccggtaatatatacagtcaattagcagtttttgacttagattgtattttt
aatccaaacccagagctactgtcaccagactacaataaagctaaacaaattcataccctt
gattcaggcaaacaaatatgtagtctagtaagtactaaaaagtttttaatagctggaaca
gtcaatgaaatttatggttgggaatggaaatccatcctcaatgtgaaattaagcaaaccc
gcatggactgtgaggataaaatcagaatcaataatacaccaatgtgatattaatggccta
tggctttctgacaatgaagagaggttgtatgccggctgtggtgacaataaagtatatgag
attaacttggaagatggtagcttggtacagacattaagtggacatgacaattttgtgcac
tgtgtgcatggcaataataaacaactcatttctgctggcgaggatggcttagttgtgctc
tgggatttgagaactagcaaatggcaaaataaaatagaaccatacaagaacagtaaagtt
gctagacctgatgtgggcaagtgggttggtgcagcatcactaggagatgattggcttgtt
tgtggcggtggcccacgtcttgcattatggcatctacgttctttggatgctgtcacagtc
tttgatatccccgaccatggcattcatgtggcgtctttccttgacgattgtgtcctagcg
ggaggaacggcccaacatctttatcagctgagctactctggagaagttagagttgaactg
cctgtgtcttcaacatccgtgtactctgccattgtacggactagcccaaataaagtgata
tccattgcgggttctagtatggacattgatctgtgtacttcatttaattatagggatcaa
gtgttacattttagatga

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