Pieris brassicae (large cabbage white): 123720352
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Entry
123720352 CDS
T08632
Name
(RefSeq) poly(A) polymerase type 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123720352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123720352
Enzymes [BR:
pbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
123720352
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
123720352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
123720352
NCBI-ProteinID:
XP_045532873
LinkDB
All DBs
Position
2:12706959..12715504
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AA seq
634 aa
AA seq
DB search
MKLVKMWPASQYSHTNNQNQNNSKGNEHQNQQNLKTLGMTSAISMAGPKQIDIDKTNELK
NSLSPYGVFESEGEMHHRMEVLGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSY
RLGVHHRGADIDALCVAPRHIDRSDYFQSFYDLLKQQPQVKDLRAVEDAFVPVIKMNFDG
IEIDLLFARLALKEIPDSFDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLT
LRAIKLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQ
PVLLKQPDSVNLGFPVWDPRVNMSDRFHLMPIITPAYPQQNSTFNVSASTRTVIMEEFRL
GLAITDEIMLGKCGWEKLFEAPNFFLRYKHFIVLLASSANGDDQLQWCGLIESKIRHLIT
TLERNQHITIAHVNPECYNSVPLNTNNGQPLALPPGTPVPSNVDVEVKKNENGEVMPNLC
SMWFIGLVFDKTNVNVDLTHDILSFTKVVHYQAETTNMLREGMTIEARHVRRKQLHQYLS
PSLIKRERTTSGAKRKQDSNAQPAPLKKSKRLSESSTDEVSILSYNEDSNSSNVYEVNIQ
NGNASNHSQEDRKSAEKPLSPPEHPSTSNTIACT
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagtcaagatgtggccagcttcacagtattcacacactaacaaccaaaaccaa
aataactcaaaaggaaatgaacatcagaaccaacagaacttgaaaactttgggaatgacc
tctgctatttctatggcaggtccaaagcagattgacattgataaaactaatgaacttaaa
aattctttgtcaccgtatggagtgtttgagtctgagggtgagatgcatcatcgtatggag
gtgctgggagcattgcatcgactggtgcgccaatggattagggatgagtccttaaggaag
aatatgccaccaagcgtggcagatactgttggaggcaatatttatacatttgggtcttat
aggctaggggtacatcacaggggtgcggatatagatgcactatgtgttgctccaaggcat
attgatagatccgattactttcagtctttctatgatctactgaaacaacagccacaggtg
aaagatttgcgcgcagtagaagatgcatttgtgcctgttattaagatgaactttgatgga
atagagattgatttgctctttgctcgacttgctttaaaggaaatacctgattcgttcgac
ctgcgagatgacatgctactgaagaatctggaccaaaaatgcgtgagatcactaaacggt
tgccgcgtaacagacgaaattttgcgtctagtgcctaatattaataattttcggttgaca
ttaagggctatcaagctatgggcgaaacgtcacggtatctactcaaacacattgggttat
ctgggaggtgtgtcttgggctatgttagttgcccgaacatgccaactctatccaaatgca
ttaccagccacattggtccacaaattctttcttgtattcagccaatggaaatggccacaa
ccggttcttctaaaacaacccgattcagtcaaccttggatttcctgtatgggacccacgg
gtcaatatgtctgatcgtttccatctgatgccgatcatcacaccagcctacccgcagcaa
aactcaaccttcaacgtatcagcttccacaagaactgtgatcatggaagaatttagactt
ggtttagcaataacagacgaaataatgttgggaaaatgtggttgggagaagttatttgaa
gcaccaaactttttcctaagatacaagcacttcattgtgttgctagcatcctctgccaat
ggagatgatcagttgcaatggtgtggccttattgagagcaagatcagacatcttataacg
accctagaaaggaatcaacacataacaatagcgcacgtgaaccctgagtgctataactcc
gtgccattgaacaccaataatggacaacccctagccttaccaccgggtactccagtaccc
tcaaacgtggatgtggaagtcaaaaagaatgaaaatggagaggtgatgcccaacttatgt
tcaatgtggttcattggtttagtttttgacaagacaaatgtgaatgttgacttgacacat
gacattttgtcattcacaaaggtcgttcactatcaagctgaaaccaccaatatgttaaga
gaaggaatgaccattgaggcaagacacgtgagacgcaaacaattgcaccaatatctatct
ccgtcgctgataaaacgagaaagaactacttcaggcgctaagcgtaagcaggacagcaat
gcacaaccggcaccgcttaagaaatcgaaacgactatctgagagtagcacggacgaagtt
agcatattgtcctacaacgaagactcaaactcatcaaacgtgtatgaggtgaacattcaa
aatggaaatgcctcaaatcattcccaagaagacagaaaatctgcagaaaagcctctcagt
cctccggagcacccttccacgtcaaacacgattgcttgtacgtag
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