Pieris brassicae (large cabbage white): 123720546
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Entry
123720546 CDS
T08632
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03013
Nucleocytoplasmic transport
pbx03015
mRNA surveillance pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123720546
09122 Translation
03013 Nucleocytoplasmic transport
123720546
03015 mRNA surveillance pathway
123720546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbx03019
]
123720546
03041 Spliceosome [BR:
pbx03041
]
123720546
03009 Ribosome biogenesis [BR:
pbx03009
]
123720546
03012 Translation factors [BR:
pbx03012
]
123720546
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123720546
Messenger RNA biogenesis [BR:
pbx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123720546
mRNA cycle factors
Stress granule specific factors
123720546
Spliceosome [BR:
pbx03041
]
Complex C
Other components
EJC/TREX
123720546
Ribosome biogenesis [BR:
pbx03009
]
Eukaryotic type
90S particles
Helicases
123720546
Translation factors [BR:
pbx03012
]
Eukaryotic type
Initiation factors
eIF-4
123720546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
TniB
UvrD-helicase
Utp25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
123720546
NCBI-ProteinID:
XP_045533161
LinkDB
All DBs
Position
2:2560576..2563642
Genome browser
AA seq
404 aa
AA seq
DB search
MASSEVSFSRKITEDLSNVEFDTSEDVEVIPTFDSMNLRDELLRGIYTYGFEKPSAIQQR
SILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLILSPTRELATQIQKVIL
ALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLD
EADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSM
HGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcagaggtatcatttagcaggaagattacagaagatctctcaaatgttgaa
ttcgacacaagtgaagatgtggaagttattccaaccttcgattctatgaacttgagagat
gaattgttacgaggaatctatacatatggatttgaaaagccatctgcaattcaacaaaga
agtattctgcctatagttaaaggccgagatgttatcgcccaagcacagtccggtacaggc
aagacagcaacattttctatctcaatacttcaatcgttggacaccacattacgtgagact
caagtattgatcctttcacctacaagagagttggctacccaaattcaaaaagttatatta
gctctaggagattatatgaatgtacaatgccatgcttgtataggtggaaccaatttgggt
gaagatattaggaagttggattatggacagcacgtagtctctggaaccccaggaagagtc
tttgatatgataagaaggcgtgtacttcgaacacgttccattaagatgcttgttcttgat
gaagctgatgaaatgttaaacaaaggatttaaagagcagatttatgatgtctaccgttat
ctgcctccagcaactcaagttgtattaatatctgctacattaccccatgaaattcttgaa
atgacttccaagtttatgacagatcctatcaggattttggtaaaacgtgatgaactcaca
ctcgaaggaataaaacaattctttgtagctgtagaacgtgaagaatggaagtttgacaca
ttgtgtgatttatatgacacattaactattacacaggcagttatattttgtaataccaag
aggaaggtggattggttgacacaaaaaatgcaagaggctaactttacagttagttcaatg
catggagatatgcctcagaaggaaagagacaacattatgaaggaatttagatcagggcaa
agccgggttctcattacaacagatgtctgggctagaggaatagatgttcaacaagtctca
ttggtcattaactatgacttgccaaacaaccgtgaattgtacattcacagaattggcaga
tcaggacgttttggacgtaaaggtgttgcaatcaactttgtaaaatctgatgatatcagg
attttaagagatattgaacaatactactcaacccaaattgatgagatgcctatgaatgtg
gcagatttattctaa
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integrated database retrieval system
