Segatella bryantii: L6471_05140
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Entry
L6471_05140 CDS
T08221
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pby
Segatella bryantii
Pathway
pby00300
Lysine biosynthesis
pby00470
D-Amino acid metabolism
pby01100
Metabolic pathways
pby01110
Biosynthesis of secondary metabolites
pby01120
Microbial metabolism in diverse environments
pby01230
Biosynthesis of amino acids
Module
pby_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pby00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L6471_05140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L6471_05140 (dapF)
Enzymes [BR:
pby01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
L6471_05140 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UKK76445
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All DBs
Position
1:complement(245112..245975)
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AA seq
287 aa
AA seq
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MSNKIRFTKMQGAGNDYIYVNTLAYPIPNPSLASQIWSKYHFKIGSDGLVLIGRPSDPAK
ADYSMHIYNADGSEAMMCGNASRCIGKYLYEKGLTFQEEIRLETLSGVKILKLHLIDNKE
TGKTEVESVTVDMLEPQLEEKAQYNAEVGKNIQIEDRIFNGTFVSMGNPHYVIFVNDIDT
IDIARYGSKLEVHPAFPQRCNIEFAEVRANGEIRTRVWERGSGITLACGTGACATAVAAA
LTGRAERKSKIVMDGGTLEIEWKANNNHIYMTGPAAFAFEGEIELPE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataagataagatttacaaaaatgcaaggagcaggcaatgattatatctatgtc
aacaccttggcttatccaatacctaatccaagtttggcttcacaaatatggagtaagtac
cactttaaaataggaagtgatggattggtactgataggaagacctagcgatcccgccaaa
gctgattactccatgcatatttataatgcagacggatctgaagctatgatgtgtggtaat
gccagccgatgtattggcaaatacctatatgaaaaaggactgacttttcaagaggaaatc
agactggaaactctttcgggagtaaaaatactgaaactccaccttatagataataaggaa
acaggaaaaacggaggttgaatcggtaaccgtagatatgttagagcctcaactcgaggaa
aaagcccagtataatgcagaagtaggaaaaaatattcagatagaagacaggatatttaac
ggaacttttgtttcaatgggcaatccacactacgtaatattcgttaatgatattgacacc
atcgacattgctcgatacggaagtaaacttgaggtgcatcctgcttttccacaacgatgc
aatatcgaatttgcagaagtaagagctaacggagaaatcagaacccgtgtatgggaaaga
ggtagcggaattaccttggcctgtggaactggtgcctgcgccactgctgtagcagctgca
ctgaccggacgagctgaacgtaaaagtaaaatcgtcatggatggcggaacactcgaaata
gaatggaaagcgaataataatcatatatatatgactggtccggcagctttcgcatttgaa
ggtgaaatcgagttacctgaataa
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