Segatella bryantii: L6471_07230
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Entry
L6471_07230 CDS
T08221
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pby
Segatella bryantii
Pathway
pby03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L6471_07230 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pby03021
]
L6471_07230 (rho)
03019 Messenger RNA biogenesis [BR:
pby03019
]
L6471_07230 (rho)
Transcription machinery [BR:
pby03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
L6471_07230 (rho)
Messenger RNA biogenesis [BR:
pby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L6471_07230 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
NACHT
OB_RNB
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UKK76823
LinkDB
All DBs
Position
1:complement(763472..765481)
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AA seq
669 aa
AA seq
DB search
MYSKEELLSKSNAELQGIASELGAHFKSRSTKEELAYAILDQQAAEGAKAPTTTKRKRVR
ISAKKEDRVYSVTGKDGENFDVLKNQAKGPVVQESSLFKEDDKKQEETTASTKRRTRKTV
KAVQEDPVSSEQETATNEKVENIETSKVSRVAEALNEASDVLHSEAQTQPEEILPDLVPE
AAFEPNEPKAGDEDDENSALLAKLQAKIQAHNETMEPKNIAENNDAAVPNMPQASMTQVW
EGDPGDGTDFITVVDIPIEDQGAVPNFDMFDRPTTPMATSAYLPVNNPVVNKAKYDFADL
ITANGVLEVMPDGYGFLRSSDYNYLSSPDDVYVAANQIKRYGLKTGDVVLCHVRPPHDGE
KYFPLTSIDKINGRTPSEVRDRIPFEHLTPLFPDTKFELCGDRETTNLSTRVVDLFSPIG
KGQRALIVAQPKTGKTILMKSIANAIAANHPEAYLMMLLIDERPEEVTDMKRTVNAEVVA
STFDEPAERHVKIAGIVLEKAKRMVECGHDVVIFLDSITRLARAYNTVSPASGKVLTGGV
DANALQKPKRFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRSL
SNKRIFPAVNLVASSTRRDDLLQDKTTLDRMWILRKYISDMNPIEAMNSIHDRMVHTRNN
EEFLLSMND
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtaaagaagaactattatccaaaagtaacgctgagttacagggtatcgctagt
gaacttggtgcacactttaaatcaagaagtaccaaggaagaattagcttatgctatcctt
gaccaacaagcggcagaaggtgcgaaagctcctaccactactaagcgaaaaagagtaaga
atctccgctaaaaaagaagacagagtttattcggtaacaggaaaagatggagaaaatttt
gatgtactcaaaaaccaagctaaaggacctgtagtacaagaatcttctctcttcaaagaa
gatgacaaaaaacaagaagaaactacagcgtcaaccaaaagacgtacacgaaaaaccgta
aaagccgtccaagaagatcctgtttcttctgaacaggaaacggctaccaatgaaaaagtc
gaaaatatagagacctccaaggtatcaagagtagcagaagcacttaatgaagcttctgat
gtactccactcagaagcacaaactcaaccagaagaaatcttaccagaccttgtacctgag
gcagcttttgaacctaacgaaccaaaagctggcgatgaagacgatgaaaacagcgcacta
ttagcaaaattacaagcaaaaattcaagctcacaatgaaacaatggagcctaagaatatt
gcagaaaataatgacgcagctgtacctaatatgcctcaagcaagtatgactcaagtttgg
gaaggcgatcctggtgacggtactgactttattacggttgttgacatacctattgaagat
caaggggctgttcctaatttcgacatgttcgatcgccctactactccaatggcaacatct
gcatatctaccagtgaacaatcctgttgtaaacaaagctaaatatgattttgcagacttg
attacagcaaatggtgtactcgaagtaatgcctgacggatatggtttcttacgcagtagc
gattacaattacctttcatctcctgacgatgtatatgtagcagcaaaccaaattaaacgt
tatggattaaaaactggtgatgtagtattatgccatgtacgaccacctcatgatggagag
aaatattttcctcttacatccattgacaaaatcaatggtagaacaccttctgaagtaaga
gacagaattccatttgaacatcttacccctctattccctgatactaaatttgaactgtgc
ggagatagagaaacaacaaacctgagcacacgagtagttgatttgttctcacctattggt
aagggacaacgtgcacttattgtagcacagccaaaaacaggtaagaccatactgatgaag
agtattgctaatgcaatagctgccaatcacccagaagcctatctgatgatgcttcttatc
gatgaacgtcctgaggaagttactgacatgaaacgtactgtgaacgctgaagttgtagct
tcaacttttgatgaaccagcagaacgacatgtcaagattgccggtattgttctcgagaaa
gcaaaacgtatggtagaatgtggacatgatgttgttatcttcctagactctattactcgt
ctcgctagagcatacaacacagtaagtcctgcttctggtaaagtacttactggtggtgtt
gatgcaaatgctctccaaaaaccaaaaagattctttggagctgccagaaatatcgaaggt
ggaggttctcttactattattgcaacggctctcatcgatacaggtagtaaaatggatgag
gttatctttgaagaattcaaaggtaccggtaatatggagcttcaacttgaccgctcactt
agcaataaacgtatcttccctgcagttaatttggttgcttcaagtacccgtcgagatgac
ttgttacaagacaagactacacttgacagaatgtggatattacgcaaatacatatcagat
atgaaccctatagaagctatgaattccattcatgatagaatggttcacacacgtaataat
gaagagttcttattgtctatgaacgattaa
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