Segatella bryantii: L6471_08110
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Entry
L6471_08110 CDS
T08221
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pby
Segatella bryantii
Pathway
pby03420
Nucleotide excision repair
pby03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L6471_08110
03430 Mismatch repair
L6471_08110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pby03400
]
L6471_08110
Enzymes [BR:
pby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L6471_08110
DNA repair and recombination proteins [BR:
pby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L6471_08110
MMR (mismatch excision repair)
Other MMR factors
L6471_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UKK76982
LinkDB
All DBs
Position
1:979086..981437
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AA seq
783 aa
AA seq
DB search
MEEKELLSQLNDSQRAAVEYLDGASLVIAGAGSGKTRVLTYKIAYLLMKGYEPWDILALT
FTNKAAKEMQSRIGSLVGADRARYLNMGTFHSIFARILRREAAHIGYNPNFTIYDEADSR
SLIKTIIKELQLDDKIYKPAGVHSKISMAKNHLIMPADYALDRELISRDIDTRQPAISQI
YTTYQQRCQNANAMDFDDLLVLTYILFREHEDIRRKYADHFRFILVDEYQDTNYAQQCII
LQLTKENPHVCVVGDDYQSIYGFRGANIDNILKFSKLYANAQLFKLEQNYRSTQHIVSAA
NSLMKKNERQIPKDVFSTNAEGEKLTLKPAYSDKEEAMIVCKDIKRIMAADHAQYCDFAI
LYRTNSQSRSFEEEMRKQDIPYRIFGGLSFYQRKEIKDIIAYFRLIANPNDEEAFKRIIN
YPSRGIGNTTLAKIAEAARKYGVSFWDVICSPTHFGLNVNKGTLNKLDVFRALITSFMEK
MPKVDAFELGQEIIKVSGITADIYSSREPEALSRQENLEEFLSGMQDFVEGRREEGREDE
IFLSDFLQDVALMSDLDSDSNGEDEQSRVSLMTIHSAKGLEFSTVFIVGLEENIFPSPMA
ASSARELEEERRLLYVAITRAEKHCILTCARNRWRYGKMEYDTPSRFLRDIDPALLNVES
ERGGMDSSVDTDYTARYSGHTSRYSSIYNQSKPKEVHLTQSHSNQNLRRVVPSSAAASTV
SSSMVSTNAGNLSVGSIIEHQRFGIGVVQKLEGTGENTKATVEFKNAGTKQLLLKFARFS
IVG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaagaattgttaagtcagctgaatgattctcagcgggctgctgtcgaatat
cttgatggagcatcattagttatagctggagctggttctggtaagacacgtgtgctgacc
tataaaattgcatatttgttaatgaaaggatatgagccttgggatattttggctcttacc
tttactaataaagctgctaaggaaatgcaatcgcgtataggaagtcttgttggtgctgat
cgtgcccgttatctcaatatgggtacttttcattccatttttgcccgtatccttcgtcgt
gaagctgctcatattggttataatcctaattttactatttatgatgaagctgattctcgt
tctttgattaagacgattatcaaagagctgcagttggatgataaaatttataaacctgct
ggtgtacatagtaagatttcaatggctaaaaaccatttgataatgccagctgattatgcg
ctggatagagagttgattagtcgtgatattgatactcgtcaacctgctattagtcagata
tatacgacttatcagcaacggtgccaaaacgcaaatgcaatggattttgatgatttgtta
gttttgacatatattcttttcagagaacatgaagatatacgccgaaagtatgcagatcat
tttagattcattttggtggacgagtatcaggataccaactatgcacaacagtgtatcata
ttgcagttaactaaagaaaatccacatgtttgtgtagtaggcgacgattatcaaagtatt
tatggtttccgtggtgcgaatattgataatattcttaagtttagtaagttgtatgctaat
gcacaactttttaaattagaacagaattatcgtagtactcaacatattgtgtctgctgct
aacagtttgatgaaaaaaaatgaacgtcagataccgaaagatgtattcagtacaaatgcc
gaaggtgagaagttgacgttgaagcctgcttacagtgataaagaagaagcaatgattgtc
tgcaaagatatcaagcgtattatggcggcagatcatgcacagtattgtgattttgctatt
ttatatcgtactaattctcagagtagaagttttgaggaggaaatgcgtaaacaggatatt
ccatatcgtatttttggagggttgagtttttatcaacgtaaagaaattaaggatatcatt
gcttattttcgtttgattgctaatccgaatgacgaggaggcttttaaacgtattattaat
tatccgtctcgtggaatcggcaataccactttggcaaaaattgcagaggcggcacgtaaa
tatggagtaagtttttgggatgttatctgttcacctactcattttggcctgaatgtaaac
aagggaactcttaataaattggatgtttttagagctctgattacttctttcatggaaaaa
atgccaaaagtagatgcatttgagttgggacaggaaattattaaagttagtggcatcact
gctgatatttattcttcacgtgaacctgaagccttgtctcgacaggaaaatttagaagag
ttcctgagtggtatgcaagattttgtcgaaggtagacgagaagagggaagagaagatgaa
atatttctttccgattttctccaagatgttgctttgatgtcagatttggatagtgatagt
aatggtgaagacgagcagagtagagtctcactgatgactattcatagtgcaaaaggtctt
gagttctctacagtctttatagtcggattagaggagaatatctttccaagtcctatggct
gctagttcggcacgggaattggaagaggagcgtagattgctttatgttgctattacgcgt
gcagaaaaacactgtattcttacttgcgctagaaatcgttggcgttatggtaagatggaa
tatgacactccaagccgattccttcgtgatattgacccagctttgctgaatgtggaaagt
gaaaggggcggaatggatagctctgttgatacagattatactgcccgttatagtggtcat
acaagtcgttattcaagtatttataatcagtctaagccaaaagaagttcatttaactcaa
tcgcattcgaatcagaatttgagaagggtagtgccttcttctgctgccgcgagtacagtt
tcgtcatctatggttagtactaatgctggtaatctgtctgtaggtagtattatagaacat
cagcgttttggtatcggtgtcgttcaaaaattagagggaactggagaaaacaccaaagct
acagtagaatttaagaatgccggtactaagcaacttcttttgaaattcgcacgttttagt
attgtgggctaa
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