Segatella bryantii: L6471_09840
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Entry
L6471_09840 CDS
T08221
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pby
Segatella bryantii
Pathway
pby03030
DNA replication
pby03430
Mismatch repair
pby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L6471_09840
03430 Mismatch repair
L6471_09840
03440 Homologous recombination
L6471_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pby03032
]
L6471_09840
03400 DNA repair and recombination proteins [BR:
pby03400
]
L6471_09840
Enzymes [BR:
pby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L6471_09840
DNA replication proteins [BR:
pby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L6471_09840
DNA repair and recombination proteins [BR:
pby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L6471_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UKK75490
LinkDB
All DBs
Position
1:1368532..1369371
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AA seq
279 aa
AA seq
DB search
MKLNLTKPLIIFDLETTGLDMVNDRIIQISYIKVMPNGEEKRGDELVNPEKPIPAFVSDL
TGITNEQVKNAPTFKEIGTKLADIFKGCDFAGFNSNRFDIPLLCEEFLRAGIDFDFSKCR
LIDAQTIFHKMEKRNLAAAYKFYTGHKMEDDFEAHRADQDTEATYRVLQGELDMYDPDKQ
EEEERKLPNNMDVLHEFSKQNDNVDFAGKIIWKDVVDANGKTLRVETFNFGKYKDIPVAE
VLHRDPGYYSWMLSSDFTLNTKQVLTRIRLQEFNKGKSF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatctcacaaagcctttaattatttttgatttggaaacaacgggtcttgac
atggtcaatgatcgaatcatccaaatctcatatataaaggtcatgcctaatggcgaagag
aaacgtggtgatgaacttgtaaatccagaaaaacctatacccgcttttgtatcagattta
acaggtatcacaaacgagcaagttaaaaatgctccgacctttaaggaaatagggacaaag
cttgccgatattttcaaaggatgcgattttgctggattcaattctaatcgttttgatata
ccgctattatgtgaagagtttcttagagcaggaatagactttgacttttcaaaatgtaga
cttattgacgcccaaactattttccacaaaatggaaaaaagaaatctagccgcagcttat
aagttctatacaggccataaaatggaagacgactttgaggcacatcgtgcagatcaggat
acagaagcaacctatcgcgtattgcagggggaactcgatatgtatgatcctgacaagcaa
gaggaagaagaaaggaaacttccaaacaatatggatgtactccatgaattctcaaaacaa
aacgataatgtagattttgctggaaaaataatttggaaagatgttgttgatgctaatggc
aaaacgcttcgagtagaaaccttcaattttggtaaatataaagacatacctgtagcagaa
gttcttcatagagatcctggatattatagctggatgttaagcagtgatttcacactcaac
accaagcaagtattaactagaatccgattacaagaatttaacaaaggaaaaagtttttaa
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