Segatella bryantii: L6471_12040
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Entry
L6471_12040 CDS
T08221
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pby
Segatella bryantii
Brite
KEGG Orthology (KO) [BR:
pby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pby03009
]
L6471_12040
Enzymes [BR:
pby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
L6471_12040
Ribosome biogenesis [BR:
pby03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L6471_12040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
TPR_ELP1
DUF7417
Motif
Other DBs
NCBI-ProteinID:
UKK75908
LinkDB
All DBs
Position
1:complement(1906878..1908278)
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AA seq
466 aa
AA seq
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MDLDLDKTQDQSAEQNESSREGYKQAGSYRSTGRPMRPRIHSQRAYSTDNNGYSSNNVNS
ASDGGFRPEGFGANLQGAGEGTSQRGGYQSRGGYGNNRGGYSNNRGGGYNNNRGGGYNNR
GGNSYRPRYNNEEEGGYQSRVGYNNDRGGYNNRGGYNNRGGGYNNNRGGGYNNNRGGGYN
NNRGGFGNNRGGYGNQGGFRQHTPGFDPNAKYSLKKRIEYKEENFDPNEPIRLNKYLANA
GVCSRREADEFIQAGVITVNGEVVTELGTKVMRTDEVKFHDQNVSLEKKVYVLLNKPKDY
VTTSDDPQQRKTVMDLVKDACPERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPKFLKKK
VYHVYLDKPVAAHDLQQIADGITLEDGEIHADAIEYADEHDKKQVGIEIHSGKNRIVRRI
FEALGYRVTKLDRVQFAGLTKKNLRRGDWRFLSEKEVDMLRMGAFE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggatttagatttagacaaaacacaggatcagtctgcagagcagaacgagtctagccgt
gagggttacaagcaagcaggctcttataggagcacaggtcgtcctatgcgtcctcgtatt
catagtcagcgtgcctatagcactgataataatggatacagtagcaataatgtaaatagc
gcgagtgatggtggtttccgtccggaaggctttggagcaaatcttcagggcgcaggagaa
ggtacatctcagcgtggtggataccagagccgtggaggctatggtaataaccgtggaggc
tatagtaataatcgcggtggtggctataataacaaccgtggcggtggttacaacaatcgt
ggtggcaatagctatcgtcctcgttacaataatgaggaagagggtggctaccaaagtcgt
gtcggttacaataatgaccgtggaggatacaataatcgtggaggatataacaaccgtggt
ggtggctataacaacaaccgtggcggaggctataacaacaatcgcggcggtggttataac
aacaatcgtggtggtttcggaaataaccgtggtggctatggcaatcaaggcggatttcgt
cagcatactccaggatttgatccaaatgcaaagtatagcttgaaaaagcgtattgaatat
aaggaggaaaatttcgatccaaacgagccaattcgtttgaacaagtatcttgccaatgct
ggtgtatgttctcgtcgtgaggctgatgaatttatccaggctggtgtgattactgtaaat
ggtgaagttgtaaccgaattgggtacaaaagttatgcgtactgatgaggttaaattccat
gatcagaatgtttctttggagaagaaagtttatgttcttcttaacaaaccaaaggactat
gttacaacaagtgatgatccacagcagcgtaaaacagttatggatcttgtaaaggatgca
tgtcctgaacgtatttatcctgtaggtcgtcttgaccgtaatacaacaggtgttcttctt
cttacaaatgatggtgatttggcaagtaaattgactcatccaaaattcttgaagaagaaa
gtttatcatgtatacttggacaagccagtagcagctcatgatttacagcagatagctgat
ggtattacgcttgaagatggtgaaatccatgcagatgctattgaatatgcagatgagcat
gataagaagcaggttggcatcgagattcacagcggtaagaatcgtatcgttcgtcgtatc
tttgaagctttaggctatcgtgtaacaaaacttgatcgtgttcagtttgctggattgacc
aagaagaatcttcgtcgtggcgattggcgcttcctttctgagaaggaagtagacatgctt
cgtatgggtgcattcgagtaa
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