Segatella bryantii: L6471_13685
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Entry
L6471_13685 CDS
T08221
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pby
Segatella bryantii
Brite
KEGG Orthology (KO) [BR:
pby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pby03032
]
L6471_13685 (topA)
03400 DNA repair and recombination proteins [BR:
pby03400
]
L6471_13685 (topA)
Enzymes [BR:
pby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L6471_13685 (topA)
DNA replication proteins [BR:
pby03032
]
Prokaryotic type
DNA Topoisomerases
L6471_13685 (topA)
DNA repair and recombination proteins [BR:
pby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L6471_13685 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UKK76204
LinkDB
All DBs
Position
1:2255849..2258182
Genome browser
AA seq
777 aa
AA seq
DB search
MQENLVIVESPAKAKTIEKFLGEDYKVMSSYGHIRDLKKKELSIDKKTLEPHYEIPEEKI
KLVSELKSTAKKAKKVWLASDEDREGEAISWHLCEVLGLDEEKTSRIVFHEITQQAILDA
IKTPRHLDMNLVNAQQARRVLDRLVGFKLSPVLWKKVKPALSAGRVQSVAVRLIVERERD
IQHFNSEQYYRVSAIFALIAPDGSATEVKAELDKRLKTHDEVVALLEKCKDSTFTVESVT
KKPLKRSPAPPFTTSTLQQEAAHKLNFTVSQTMMIAQHLYEAGKITYMRTDSVNLSTLCI
NASKDAIIKHYGKEYSKPRNFTTHSKGAQEAHEAIRPTDMSKSEIEGSSQEKRLYNLIWK
RTAASQMADAQIEKTTVNITISNADDKFVANGETIAFDGFMKVYNVTNDDEENQEDYLRI
LPSLKEGDNLQRREITATQRFSQAPSRYTEASLVHKLEELGIGRPSTYAPTISTIQQREY
VLRGDHPGTERQYTVDTLKGIQITQKTKKENTGSDKGKLVPTDIGIVVNDFLIENFPGIM
DYNFTAKVEQQFDLIAEGKEEWTTMMKDFDTKFEPIVEKVMKARSEHKAGERELGTDPKS
GKPVFVKIGRFGPVVQIGSANDEEKPKFAQMPADKSIETISLEEALELFKLPRELGEYEG
ETVTIGAGRFGPYVLHMKKYVSIPKTIDPMEITLEEAIQLINDKREQEKKKHIKKFEEND
KLEILNGRYGPYIAYDGKNYRLPKELHEKAAELTLEECIKIVNNAPEPKARTRKARK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatctagttatagtcgagagccctgcgaaggcaaagacaatcgaaaagttc
ttaggagaagactataaggttatgtcttcctatggtcacattcgtgacttgaaaaagaaa
gagctaagcatagacaaaaagacactcgaacctcattatgagattcctgaagagaagatc
aaattggtttcagaactaaagtcgaccgccaaaaaggctaaaaaagtttggttagcatcc
gatgaggaccgcgaaggagaagctatctcatggcacctttgcgaagtattaggattagat
gaagaaaaaactagccgaattgttttccacgaaattacacaacaagcgattcttgatgca
atcaagacacctagacatctagatatgaatcttgtcaatgctcagcaggcaagacgtgta
ctcgaccgtttggtaggtttcaaactttctccagtattatggaaaaaagtaaaaccagcg
ctctctgccggtcgtgtacaaagtgtcgctgtacgacttatcgtagagcgcgaaagagat
attcagcactttaacagtgaacaatactatcgtgtaagtgctatttttgcactcattgct
cctgacgggtcagctacagaagtaaaagctgaactcgataagcgcctgaagacccatgac
gaagtggttgccttacttgagaagtgcaaggattcaacttttaccgttgaatcagttacc
aagaagcctttgaagcgttctcctgcacctcctttcaccacctcaactctacaacaggaa
gcagcacacaagctcaattttacagtaagtcaaaccatgatgatagctcagcacctttat
gaggcaggtaaaataacctacatgcgtactgactccgtaaacttgtctacgctatgtatc
aatgccagcaaggacgctatcattaagcattatggtaaagaatacagtaaaccacgtaat
ttcacaactcattctaaaggtgcacaagaagcccacgaggccatccgtcctacagatatg
agcaaatctgagattgaaggttcttcccaggagaaacgtctctataatctaatttggaaa
cgtactgcagcatcacagatggcagatgctcagattgaaaagactactgtaaatattact
attagcaatgctgacgataaatttgttgccaatggtgaaactatcgcgttcgacggcttc
atgaaagtatataacgtcaccaatgatgatgaagaaaatcaggaagactacttgcgtata
cttccttctctgaaagaaggcgacaatttacaacgtcgtgaaattacagctacccagcgc
ttttcacaagcaccttcaagatatacagaagctagtttggtacacaaactggaagaactc
ggtattggacgtccatctacgtatgcaccaactataagtactatacaacaacgtgaatat
gtattaagaggtgaccatccaggaacagaacgccaatatacagtagatactctaaaaggt
atccaaattacccaaaagactaaaaaggaaaacacaggttctgacaagggtaaacttgtt
cctaccgatatcggtatcgtggttaacgatttccttatagaaaacttccctggcatcatg
gattataacttcacagccaaagtagaacaacagttcgacttgatagctgaaggtaaagaa
gagtggacaaccatgatgaaggacttcgatactaaattcgagccaattgttgaaaaggta
atgaaagctcgaagcgagcacaaagcaggtgaacgcgaactgggtacagaccctaagagt
ggaaagcctgtatttgtcaagattggccgattcggaccagtagtacagataggttctgct
aacgatgaagaaaagcctaaatttgctcaaatgccagcagataagagcatcgaaaccata
tcactagaggaagcattagaactcttcaaattaccaagagaactgggtgaatacgaaggc
gaaaccgtaaccattggtgcaggccgattcggaccatacgttctccatatgaagaaatat
gtatctatacctaagaccattgatccaatggaaatcacgttggaagaagcaatacagctt
atcaatgataaacgtgaacaggaaaagaaaaaacatatcaagaaatttgaagaaaacgat
aaattggagattcttaatgggcgctacggtccatatattgcctatgacggcaaaaactac
cgtttgccaaaagaacttcacgagaaagcagcagaactcaccctcgaggaatgcataaaa
atcgtgaacaatgccccagaaccaaaagcaagaaccagaaaagctcgcaagtga
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