Pseudomonas bijieensis: GN234_03465
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Entry
GN234_03465 CDS
T07266
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GN234_03465
09124 Replication and repair
03420 Nucleotide excision repair
GN234_03465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbz03021
]
GN234_03465
03036 Chromosome and associated proteins [BR:
pbz03036
]
GN234_03465
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_03465
Enzymes [BR:
pbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GN234_03465
Transcription machinery [BR:
pbz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GN234_03465
Chromosome and associated proteins [BR:
pbz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GN234_03465
DNA repair and recombination proteins [BR:
pbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GN234_03465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKS81062
UniProt:
A0A6N1C9T2
LinkDB
All DBs
Position
complement(852043..854346)
Genome browser
AA seq
767 aa
AA seq
DB search
MNLLPGYSIAVRALCEFTAKVGDLDLRFTPSPTALEGIAGHRTVASRRSEGYQSEVALEG
HYQALKVKGRADGYDPDRQCLEEVKTYRGDLAKQPANHRQLHWAQAKIYGWLMCQKLQLS
HIDVALVYFDIVSEKETCITQPFEATELQAFFEAQCALFLAWAEQEMAHRQARNLGAQSL
VFPHAGFRPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTIGTLFPLLKALAPQRLDKVYF
LTAKTPGRKLALDAARVLTHSAPSMPLRVLEMIARDKACEHPDKACHGESCPLARGFYDR
LPGARAAASQVTLLDQAALREIALAHEVCPYYLSQEMARWADVVVADYNYYFDFNALLFG
LAQANGWTVATLVDEAHNLVERGRQMYSATLDQAALTSVRKTAPEPLKKSLERVNRQWNA
LHTPQMAAYQAYEKLPEKLLQALASCTTAIGDYLNDHPQGLDSGLQAFYFDALQFGRVAE
SFDEHFVFDIHKRELGRQRSLSTLCLRNVVPAAFLAPRLTAARSTVLFSATLSPRHYYAD
LLGTPGDTVWIDVESPFKAEQLDVQVVSRISTRFAHRQASLEPIVELMARQFRERPGNYL
AFFSSFDYLQQVAGLFAERYPQIELWTQSRGMGEAPRQAFIERFMEHSQGIGFAVLGGAF
GEGIDLPGSRLIGAFIATLGLAQFNPVNEQMKQRMAAIFGDGYDYTYLYPGLQKVVQAAG
RVIRTQQDRGVVLLIDDRFGEARVQHLLPRWWSVTQEVHKSPGGNQV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgctgccaggctacagcatcgccgtgcgggcgctttgtgagttcactgccaag
gtgggtgacctcgacctgcgcttcacaccgtcgcccacggccttggaaggtatcgccggc
catcgcaccgtggcctcgcggcgcagcgaaggctatcagtctgaggtggccctcgaaggt
cactaccaggcactgaaagtcaaaggccgggccgacggctatgacccggatcgccagtgc
cttgaagaagtgaagacctaccggggcgacctggccaagcagcccgccaatcatcgccag
ctgcattgggcacaggcgaaaatctatggctggctgatgtgccagaagctgcagttgtcg
cacatcgacgtggcgctggtgtacttcgacatcgtcagcgaaaaggaaacctgcatcacg
caacccttcgaggcgacggagctgcaagcctttttcgaagcgcaatgcgcgttgttcctg
gcctgggccgaacaggaaatggcccatcgacaggcacgcaaccttggcgcgcagtcgctg
gtgtttccgcatgccggtttcaggcccgggcaacggcacttggccgagtcggtgttcaag
gcggtcagcaccggtcgctgcctgatggcccaggcacccactggcattggcaagaccatc
ggcaccttgtttccgttgctcaaggccctggcgccgcagcgactggacaaggtgtacttc
ctaacggcgaagaccccagggcgcaagctggccctggatgcggcacgagtgcttactcac
agcgcaccgtcaatgccgttacgggtgctggaaatgatcgcccgggacaaggcctgcgaa
cacccggacaaggcctgccatggcgaatcctgcccgctggcccgcggtttctacgaccgc
ttgccgggcgcccgggcggcagcgagccaggtcacgttgctcgaccaggcggcgttgcgc
gaaattgcgctggcccatgaggtctgcccgtattacctaagccaggaaatggcccgttgg
gccgatgtggtggtagccgactacaactattacttcgatttcaacgccttgctcttcggc
ctggcccaggccaatggctggaccgtcgcgaccctggtggatgaagcccacaacctggtg
gagcgcggacgacagatgtacagcgcgaccctcgaccaggccgcgctaaccagcgtgcga
aaaaccgcccctgaaccactgaagaaatccctggagcgggtcaatcgccagtggaacgcc
ttgcacacgccccagatggcggcctatcaggcctatgaaaagctgccggaaaaactgctc
caggccctggctagctgtaccacggccatcggcgattacctcaatgatcatccccagggc
ctggacagcggtttacaggcgttttacttcgatgccttgcagtttggccgagtggcggaa
tccttcgacgagcactttgtgttcgacatccacaagcgcgaactcggtcgccagcgcagc
ctgtccactctgtgcctgcgcaatgtggtgccggctgcattcctggcccccaggctgacg
gccgcccgtagcacggtgctgttttccgcgaccctgagccctcgacactactatgcggac
ttgttggggacgccgggcgacacggtatggatcgatgtcgaatcaccattcaaggccgaa
cagctggacgtgcaggttgtcagccgcatctccacccgttttgctcaccgccaggcgtcc
ctggagccgattgtcgagttgatggctcgccagttccgcgagcggccaggcaactacctg
gcctttttcagcagcttcgattacttgcagcaagtggccgggctgtttgccgaacggtac
ccacagattgaactctggacgcaatcgcggggcatgggcgaagcccctcggcaggcgttt
atcgagcgcttcatggagcacagccaaggtatcggttttgccgtgttgggcggcgcgttc
ggcgagggcatcgatttgccgggctcacgcctgatcggcgccttcatcgccaccttgggg
ctcgcgcagttcaacccggtcaatgagcagatgaaacaacgcatggcggcgatcttcggc
gacggctacgactacacctacctgtaccccggcctgcaaaaagtcgtacaggcggctggc
cgcgtcatccgtacccagcaggatcgcggggtggtgctgctgatagatgatcggtttggc
gaggcgagggtgcagcacttgttgccgcgttggtggtcagttactcaagaggtgcacaaa
tctcccggtgggaaccaggtttga
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integrated database retrieval system
