Pseudomonas bijieensis: GN234_05440
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Entry
GN234_05440 CDS
T07266
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pbz
Pseudomonas bijieensis
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_05440
DNA repair and recombination proteins [BR:
pbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GN234_05440
Archaeal homologous recombinant proteins
GN234_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
RsgA_GTPase
MMR_HSR1
cobW
nSTAND3
NQRA_2nd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKS81419
UniProt:
A0A6N1C8C7
LinkDB
All DBs
Position
1317009..1320650
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDVDGEIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDLDNDQLLASQKGEYKAQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKETHKQLQDQATGVTPLAPEARAELDQRF
NDAQQQLKAQQAQLKQLELQHTWLKDLRQLQDEQTSAAEQLQQAQVDWDALADERLKLTR
LEQLAPQRHQFIRQTELTRQLEPLAVQIQQLTQQQIDLQAQQTTLEKDLANAQLALTTAR
QHSSDSAPLLRQAFDEQSTLTRLARDVSQSAERQEQAQQACSEGQRTIDSLLEQQRLVAE
RLQRIAGELEQSTHLAPLSDAWNAYRDRLQQLMLIGNRLNKGQAELTALEQSAARAFEAL
ANQRQNLEVLYKEAGAEPEAVAEQIQLLGNLLQDNRKQLRAFEDLTRLWASQQELDKRGA
ELEQRQQRALQERDRLVREGGEAKAELTIAEQTLTVTRELLERQRLARSESVEQLRAQLQ
DEQPCPVCGSVEHPYHQPEALLQSLGRFDETEEANARKVVDLLNEKVIDLRAQYSGVIAQ
LKELKQQQEQLAAQQQSLAPSLEAHPLSTQLLAQDSNKRDAWLAQQNSQLHQHINQDEQR
QTALLTLQQDAARLAQQLRNAETASQQASQQLSNQQQELARDRQRLDDELHHFSALLPAD
TLQALRTEPAATFMQLDQQIAQRLEQLEQQRDEFGEQLQRQQTLEKEQDRQQTRVQQLES
AQQQFKALTEQHHACQEKLTHLLGSYASAEQWQQQLDQALEQARLGEAAANQQLQQLRNN
LVQLAAELKARQEQAQSLDSELQALATGIAQWRTTHPELDDASLEALLSLDEQHVSQLRQ
RLLNSEKAIEQARVLLTEREQRLQNHQAQHNGNLAPEQLAQALADLQAQFAVSEQRCAEL
RADQAEDQRRQNANQALAQQIDQAYTEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTVEVT
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgcgatccgcctcaagaacctggcgtccctggccgggccttttgaaatc
gatttcaccgccgaacccttggccagcgccggcctgttcgccatcaccggccccaccggt
gccggcaagagcaccctgctcgacgccttgtgcctggcgctgttcggcgccgtgccacgt
ctcaataacaccggacgcgacgccaaggtgccggacgtcgatggcgaaatcgccacaggc
gacccgcgcacgctattgcgccgtggtaccggcgatggttatgccgaagtggattttcgc
ggcatcgacgggcgccgctatcgggcccgctgggaagccaatcgcgcccgggaaaaggcc
ggtggcaagttgcaagccagccgccagagcctgcgggacctggacaacgatcaactgctg
gcgagccagaaaggcgagtacaaggcccagctcgaagccgccctgggcctgaatttcgaa
cagttcacccgcgccgtgctgctggcccagagcgagttcagcgcgttcctcaaggccgat
gacaacgatcgcagcgaactgctggaaaaactcaccgacaccgccctgtacacccgcctc
ggccgccgtgccttcgacaaggccaagcaagccaaggaaacccacaagcagttgcaggac
caggctaccggcgtgacaccgctggccccggaggcccgggccgagctggaccagcgcttc
aacgacgcccagcaacaactcaaggcccaacaggcacaactcaagcagttggagttgcaa
cacacctggctcaaggacctgcgccagttgcaggacgaacagaccagcgccgccgagcag
ctgcaacaggcccaggtcgattgggatgcgctggccgacgaacgcctgaaattgacgcgc
ctggaacaactggcgccccagcggcatcagttcattcgtcagacggaactgacccgccag
ctcgaaccgttggcggtgcagatccagcaactcacccagcagcagatcgacttgcaggca
cagcagaccacgctggagaaggacctggccaatgcgcaactggcactgaccaccgctcgc
cagcacagcagcgacagcgcgccgttgctgcgtcaggccttcgacgagcaaagtaccctc
acccgcctcgccagggacgtcagccagagcgccgagcgccaggaacaggcgcaacaagct
tgcagcgaaggccaacgcacgattgacagcctgctcgaacagcaaaggctggtggccgag
cgcttgcagcggatcgccggcgaacttgaacaaagcacgcacctggcaccgctgagcgat
gcctggaacgcctatcgcgatcgcctccaacaactgatgctgatcggcaatcgcttgaac
aagggccaggccgaactcaccgccctggaacaaagcgccgcgcgcgccttcgaggcgctg
gcaaaccagcgacaaaacctcgaagtgctctataaagaagccggcgctgaaccggaagcg
gtggccgaacagatccagttgctcggcaacctgctgcaagacaaccgcaagcaactacgc
gccttcgaagacctgacccggttgtgggccagtcagcaagagttggacaaacgcggggcc
gagcttgagcagcgccagcaacgagcgctgcaggaacgtgaccggctggtgcgtgaaggc
ggcgaagccaaggccgaactgaccattgccgaacagaccctgaccgtcacccgggaactg
ctggagcgtcagcgcctggcccgcagtgaaagcgtcgagcaactgcgcgcgcagttgcag
gacgagcaaccgtgcccggtgtgcggcagcgtcgagcatccttaccatcagcccgaagcc
ctgctgcaaagcctcgggcgcttcgatgaaaccgaagaggccaacgcccgcaaggtcgtc
gacctgctcaatgaaaaagtcatcgacctgcgggcccaatacagtggcgtcatcgcccaa
ctcaaggagctcaagcagcagcaggaacaactcgccgcccagcaacaaagcctggcgccc
agccttgaagcccacccgctgtcgacgcaattgctggcccaggattcgaacaaacgcgac
gcctggctggcgcagcagaacagccagttgcaccagcacatcaaccaggacgaacaacgg
caaaccgccctgctgaccctgcaacaggacgccgcgcgcctggcgcagcaactgcgcaat
gccgaaacggccagccagcaggcatcacagcaactgagcaatcagcagcaggaactggcc
cgtgatcgccagcgcctggacgatgaattgcatcacttcagcgctttgttgccagcagac
acgttgcaagccttgcgcaccgagcccgccgccaccttcatgcagctcgatcagcaaatc
gcccaacgcctggagcaattggaacagcagcgtgacgaattcggcgaacaactccagcgt
cagcaaaccctggagaaggaacaggaccgccagcagacccgcgtgcagcaattggaatcg
gcgcagcagcaattcaaggccctgaccgaacaacatcacgcttgccaggaaaaactcaca
cacctgctgggctcatacgccagcgccgaacagtggcagcaacaactcgatcaggccctg
gaacaggctcgtcttggcgaagcagcggccaatcaacagctgcagcaattgcgcaacaac
ctcgtgcaactggccgccgaactcaaggcccggcaggaacaggcccagtccctggacagc
gaactccaggccctggcaacgggcatcgcgcaatggcgcacgacccatcccgaactggac
gacgcctccctcgaggccctgctcagcctcgacgaacagcacgtcagccagttgcgccaa
cgcttgctcaacagcgagaaagccatcgaacaggcccgcgtactgctcaccgaacgcgag
cagcgcctgcaaaaccaccaggcccagcacaacggcaacctggcgcccgaacaactcgcc
caggccctcgccgacttgcaggcccaattcgccgtcagcgaacagcgttgcgccgaattg
cgcgccgaccaggccgaggaccagcgccgacagaatgccaaccaggccctggcccagcag
atcgaccaggcctacaccgagtaccaacgctgggcacgcctggatgcgctgatcggctcg
gccaccggcgaccgcttccgcaagctggcccaggcctacaacctcgatttgctggtgcac
cacgccaacgcccaactgcggcaattggtgcgccgctatcggctcaagcgcggcggcagc
atgctcgggctgctggtgatggacacggaaatgggcgatgaactgcgctcggtgcattcg
ttgtccggcggcgagactttcctggtctccctcgccctggcgttgggcctggcctcgatg
gcgtccagcaccctgaagatcgaatcgctgttcatcgacgaaggttttggcagcctcgat
cctgaatccctgcaactggcgatggacgccctcgacggactgcaggcccaaggtcgcaag
gtcgcggtgatttcccacgtgcaggaaatgcacgagcggatcccggtacagatccaggtc
cggcgccagggcaacggcttgagcacggtggaggtgacatga
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integrated database retrieval system
