Pseudomonas bijieensis: GN234_06515
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Entry
GN234_06515 CDS
T07266
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbz
Pseudomonas bijieensis
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbz03032
]
GN234_06515
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_06515
Enzymes [BR:
pbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GN234_06515
DNA replication proteins [BR:
pbz03032
]
Prokaryotic type
DNA Topoisomerases
GN234_06515
DNA repair and recombination proteins [BR:
pbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GN234_06515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QKS81617
UniProt:
A0A6N1CC99
LinkDB
All DBs
Position
1574427..1575482
Genome browser
AA seq
351 aa
AA seq
DB search
MPDTLPPDALPADLHYVDDTAPGITRRKLRGKFCYFNPQGQRITDAAEIQRINALAVPPA
YTDVWICTDPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRMLEFGRTLPRLRKRLE
EILAQPGFSRDKVMATVITLLDVTLIRVGNTQYARDNRSYGLTTLRSKHVEVNGSAIAFQ
FRGKSGVEHQITVKDRRLARIIKRCQEIPGQNLFQYLDEHGERHAITSSDINAYLKTLTG
ADFTAKDYRTWAGSAAALAGLRTLRWETETEAKKHVAEMVRHVARQLGNTPTVCRKCYIH
PAVVEGFLLGALGELPKPRARKGLSEEEAGLTLFLQRMRDAAQACEQQQPA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccctgcccccggacgcactgccggccgacctgcattacgtcgacgacacc
gccccgggcatcacccggcgcaaattgcgcggcaagttctgctacttcaacccgcagggc
cagcggattaccgacgccgccgaaatccaacgcatcaacgccttggccgtaccgcctgcc
tacaccgatgtgtggatctgcaccgacccacgcggccatctccaggccaccggtcgcgat
gcccggggccgcaagcaataccgttaccacgcgcgctggcgtgaagtgcgcgatgcggac
aaatactcgcgcatgctcgaattcggccgcaccctgccgcgcttgcgcaaacgcctggaa
gagatcctggcccagcccggtttcagccgcgacaaggtcatggccacggtcatcaccttg
ctggacgtaaccctgatccgcgtcggcaacacccagtacgcccgagacaatcgctcctac
ggcctgacgaccctgcgcagcaaacatgtcgaggtcaacggcagcgccatcgccttccag
ttccgtggcaagagcggcgtcgaacaccagatcaccgtgaaagaccggcgcctggcacgg
atcatcaagcgctgccaggagatccccgggcagaacctgttccagtatctggacgaacac
ggcgagcgccacgccatcacttcttcggacatcaacgcctacctcaagaccctcaccggt
gcggacttcaccgccaaggactaccgcacctgggccggcagtgcggcggccctggccggg
ctgcggacgctgcgttgggaaaccgagaccgaggccaagaaacacgtggccgagatggtc
aggcacgtcgcccggcaactgggcaacacgccgaccgtctgtcgcaagtgctacattcat
cctgcagtggtcgagggtttcctgctcggcgccctgggggaactgcccaaaccccgggca
cgtaaaggcctcagtgaggaagaagccgggttgacgctgttcctgcagcgcatgagagac
gccgcccaggcgtgcgaacaacagcaaccggcttga
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