Pseudomonas bijieensis: GN234_10605
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Entry
GN234_10605 CDS
T07266
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GN234_10605 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbz03019
]
GN234_10605 (recQ)
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_10605 (recQ)
Enzymes [BR:
pbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GN234_10605 (recQ)
Messenger RNA biogenesis [BR:
pbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GN234_10605 (recQ)
DNA repair and recombination proteins [BR:
pbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GN234_10605 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HTH_23
Sigma70_r4_2
Sigma70_r1_2
GerE
Motif
Other DBs
NCBI-ProteinID:
QKS82369
UniProt:
A0A6N1CAX1
LinkDB
All DBs
Position
complement(2464428..2466554)
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKK
VDEVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTG
QRYGVGHLVDVLLGKDNEKIRNFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLE
GYGGLRLSETCRPLLKGEVTLELRRDLKPATAIKSSKSQASQLVRGEERDQWEALRALRR
KLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVLGGEAE
APKAVADVRHELITLARAGMTPLQIAGQLQCSEKNVYTMLAEAIGKQQLSLEQALDLPEE
LMGEVQDAFLDGEGELPPVSEVAALFVGRVPEGVLYCVRAALQSEFEV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcaacgcgtcctcaaggacatcttcggctacgacagtttccgtggc
cgccagggtgccattattgagcgcgtggccagcggtggcgatgccctggtgctgatgccc
accggcggcggcaagtccttgtgcttccaggtgccggcgctgctgcgcaacggcctggcg
gtggtggtttcgccgctgatcgcgctgatggacgaccaggtcgcgaccctcgaggagctg
ggtgtcgccgccgcttcgctgaactccaccctcagcgccgagcaacagcgggacctggcg
acgcgcatcaagcgcggcgaagtgaagatgttgtacctggccccggaacgcctggtgcag
ccgcgcatgctggcgttcctgcagagcctggagatcgccctgttcgccatcgacgaagcc
cactgcgtgtcccagtggggccatgatttccgccgtgaatacctgcaactggggcaactg
gcggaactgttccccgacgtgccgcgcatcgccctgaccgccaccgccgacaagcgcacc
cgcgaagaaatcgtcgagcgcctgcacttgcaggatgccgagcggttcctgtcgagcttc
gaccgtcccaatattttctaccgcatcgtgcccaaggagcagccgcgcaagcagttgctg
gcgttcctcgccgagcgccgtagcgatgcaggcattgtctattgcctgtcgcgcaaaaaa
gtcgatgaagtggcagcgtttctgtgtgagcaggggttcccggcgttgccatatcacgcg
ggcctgcccaacgacctgcgggcctatcaccagaagcgcttcctcaacgaggaaggcctg
atcatggtggccaccatcgcgttcggcatgggtatcgacaagcccaacgtgcgctttgtc
gcgcacctggacctgcccaagtccctcgaggcgtattaccaggaaaccgggcgggccggc
cgtgatggcttgccggccgacgcctggatggcctacggcctgcaagacgtggtgatgctc
aagcagatgctgcagaactccgaaggcgatgagcgccacaagcgcctggaacagcacaag
ctcgacgccatgctctcgctgtgcgaagaaacccgctgccgtcgccagaccctgctggcc
tatttcgatgaagacatgcctcagccgtgcggtcattgcgacaactgcgtcgatggcgtg
gaaacctgggacgccaccgagccggcccgccaggccctgtcggcgattttccgcactggc
cagcgctatggcgtggggcatctggtggacgtgttgctgggcaaggacaacgagaagatc
cgcaacttcggtcatcagcacctttcggtattcggggtgggcaaggcccgcaccgagagt
gaatggcgttcattgttccgacaactcgtggcccgcggcctggccgacatcgacctggaa
ggctacggcggcctgcgtttgtctgaaacctgccggcctttgctcaagggtgaggtcacc
ctcgaactgcgccgcgacctcaagccggcaacggcgatcaagagcagcaagagccaggcc
agccaactggtgcgcggcgaagagcgcgatcaatgggaagccttgcgcgccttgcgtcgc
aagctggccgaagaacacggcgtgccgccgtacgtcatcttccccgactcgacgctgctg
gaaatgctccgcagccagcccacctccctggcggaaatggcccgggtcagtggcgtcggc
gcgcgcaaactggaacgctatggcgaggccttcctccaggtactgggcggcgaggccgaa
gcaccgaaagcggtggccgatgtacgccacgaactcatcaccctggctcgcgccggcatg
acgccgttgcagatcgccgggcaattgcagtgctcggaaaagaacgtctacacgatgctg
gccgaggccatcggcaaacagcagttatccctggaacaggcactggatctgcccgaagag
ctgatgggagaggtacaggacgcgttcctggatggcgaaggcgagttaccgccagtgtct
gaagtcgctgcattgtttgtcggacgagttcccgaaggcgtgctgtactgcgtcagggct
gcgttgcagtcggaatttgaagtctga
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integrated database retrieval system
