Pseudomonas bijieensis: GN234_11590
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Entry
GN234_11590 CDS
T07266
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pbz
Pseudomonas bijieensis
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbz03021
]
GN234_11590 (rapA)
Transcription machinery [BR:
pbz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GN234_11590 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QKS82555
UniProt:
A0A6N1CD47
LinkDB
All DBs
Position
2687775..2690621
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DVITHFEGWKMTVREVDDVDGLLVYHGLNGQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
SNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSPQYALVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLKAFRAESENYRPVAEAVQELLDK
GRLSPEAHKTIHGFLGNEGEALLTAVNDGDVEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPCPDEYLELPLGDHAELYPEVSFQAQPDASEEERWWRFDPRVEWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHTIELHVPYLETSP
QARLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLEEADDGQWQALIDEARAERERLE
AELHTGRDRLLELNSGGAGEGDALVEAILEQDDQFTLPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLAARVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIAPRHAERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRQQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagtgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgccagtacgcgctacggaatgcgccgctcacccgcgtacggttttccccgggc
gatgtgatcactcacttcgaaggctggaaaatgaccgtgcgcgaagtcgatgatgtcgat
gggctgctggtctaccacggcctcaatgggcagaacgaagtcgtcaccctgccggaaacc
cagctctcgaatttcatccagttccgcctggccagcgaccgtctgttcgccggtcagatc
gacccactggcctggttctccctgcgctaccacaccctggagcacaccagtcgccagttg
cagtcttcgctctggggcctggggggtgtccgtgcccagccgatcgcccaccagttgcac
attgcccgtgaagtggccgaccgcatcgcaccacgggtgttgctggcggacgaagtcggc
ctgggcaagaccatcgaagccggcctggtgatccaccgtcaactgctctccggtcgtgcc
aatcgcgtactgatcctggttccggaaaacctccagcatcagtggctggtggaaatgcgt
cggcgtttcaacctgcaggtcgcgctgttcgacgaagaacgcttcatcgaaagcgatgcc
agcaacccgttcgaagacacccagttggccctggtggcgctggagtggctggtggacgac
gagaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgacgaagct
caccatctggtttggcacgaagaccaggtcagcccgcagtacgccttggtcgaacagctc
gccgagacgatcccgggcgtgctgctgctgaccgcgaccccggaacaactgggccaggac
agccacttcgcccgcctgcgcctgctggaccccaatcgcttccatgacctgaaggccttc
cgcgccgagagcgaaaactatcgcccggtggccgaagccgtgcaggaattgctggacaag
ggccgtctctcgcccgaagcccacaagaccatccacggcttcctgggcaacgaaggcgaa
gccttgctgaccgccgtcaatgacggcgatgtcgaagccagtgcccgcctggtgcgcgaa
ttgctggaccgccacggcaccggccgcgtactgttccgcaatactcgcgccgcggtgcag
ggcttcccggagcgcaagctacacgcctacccgctgccatgcccggacgaatacctcgag
ctgccgttgggcgatcatgccgagctgtacccggaagtcagcttccaggcccagccggac
gccagcgaagaagagcgctggtggcgtttcgacccgcgggtcgagtggctgatcgacacg
ctgaaaatgctcaagcgcactaaagtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgttccggcatcccggccacggtgttccacgaaggc
atgaacatcctggagcgcgaccgcgcggcagcctatttcgccgacgaagaattcggcgcc
caggtgctgatctgctcggaaatcggcagtgaaggccgtaacttccaattcgcccatcat
ttggtgctgttcgacctgccgtcccacccggacttgctggagcagcgcatcggccgtctg
gaccggatcggccagaaacacaccatcgagctgcatgtgccgtacctggaaaccagcccg
caagcgcgcttgttccagtggtatcacgaagccctgaatgccttcctcaacacctgcccg
accggtaacgccttgcagcatcagttcggcccgcgcctgctgcccttgctggaagaagcc
gacgatggccagtggcaagcgctgatcgacgaggcccgcgccgaacgcgagcgcctggag
gctgagctgcacaccggccgcgaccgtttgctggagctcaactccggcggcgcgggtgaa
ggcgatgcgctggtggaagccattctcgagcaggacgaccagttcaccctgccaatctac
atggaaaccctgttcgacgcgttcggcatcgacagcgaggaccactcggaaaacgccctg
atcctcaagccaagtgaaaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcaaccaggcgctgtctcgcgaagacatgcaattcatcacc
tgggagcatccgatggtgcaaggcggcatggacctggtgttgtccggctccatgggcaac
accgccgtggcgctgatcaagaacaaggccctcaagcctggcaccgtgttgctggaattg
ctctacgtcagtgaagtggtagccccacgctcactgcaactgggccgttacctgccaccg
gccgccctgcgctgcctgctggacgccaacggcaacgacctggccgcccgggtctcgttc
gaaaccctgaacgaccagctcgaaagcgtgccccgtgccagcgccaacaagttcatccag
gcccagcgcgaccaactgacgccacggatcaacgccggtgaagagaaaatcgccccgcgc
catgccgaacgcgtggccgaggcccagcgccgcctggccgccgataccgacgaggaactg
gcgcgcctgaccgccctgcaagcggtcaacccgaccgtgcgcgacagcgaactggtggcc
ctgcgccaacagcgtgagcagggcctggcgatgcttgagaaggccgcgttgcgcctggag
gcgattcgggtgttggtagcgggctga
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