Pseudomonas bijieensis: GN234_12240
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Entry
GN234_12240 CDS
T07266
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbz
Pseudomonas bijieensis
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbz03009
]
GN234_12240 (rimO)
Enzymes [BR:
pbz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GN234_12240 (rimO)
Ribosome biogenesis [BR:
pbz03009
]
Prokaryotic type
ribosomal protein modification factors
GN234_12240 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
QKS82669
UniProt:
A0A6N1CBM7
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All DBs
Position
2829919..2831259
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AA seq
446 aa
AA seq
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MSTTTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLSVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQIG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactaccgcgccagccaatccgaaggttggcttcgtatccctgggttgcccg
aaggctctggtcgactccgagcgcatcctgacccaactgcgcatggaaggctatgatgta
gtgtccacttaccaggacgccgacgtggtggtggtcaacacctgcggcttcatcgattcg
gccaaggccgagtccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtggaagaaggcaacatccgcaacgtgcacccgagcgtgctg
tctgtaaccggtcctcagcagtacgaacaggtggtcaacgccgtccacgaagtggtgcca
ccgcgccaggaccacaacccgctgatcgacctggtgccgccacagggcatcaagctaacc
ccgcgccactatgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtgagccgcccggtgggcgatgtgctcgacgag
gcccagcgcctggtcaaggccggcgtcaaggaattgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtgaagtaccgcaccggcttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcaccctcggcgtctgggtccgcctgcattac
gtctacccgtacccacatgtcgacgaactgatcccgctgatggcggccggcaagatcctg
ccgtacctggacatcccgttccaacacgccagcccgaaagtcctcaaggccatgaagcgc
ccggcgttcgaagacaagaccctggcccggatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggcttccccggtgaaaccgaagaagacttccag
tacctcctggactggctgaccgaagcccaactcgaccgcgttggctgcttccagtattcc
cctgtcgaaggcgcaccggccaacgacctggacctggacgtggtgccggacgacgtcaag
caggaccgttgggagcgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtgctggtggatgaagtggacgagcaaggcgccgtg
ggccgctgcttcttcgacgcgccggaaatcgacggcaacgtcttcatcgacaacggcagc
aacctcaagccgggcgacaaggtctggtgcaaggtgaccgacgccgacgaatacgacttg
tgggctgaacagatcggttga
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