Pseudomonas bijieensis: GN234_12540
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Entry
GN234_12540 CDS
T07266
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz03030
DNA replication
pbz03430
Mismatch repair
pbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GN234_12540 (dnaE)
03430 Mismatch repair
GN234_12540 (dnaE)
03440 Homologous recombination
GN234_12540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbz03032
]
GN234_12540 (dnaE)
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_12540 (dnaE)
Enzymes [BR:
pbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GN234_12540 (dnaE)
DNA replication proteins [BR:
pbz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GN234_12540 (dnaE)
DNA repair and recombination proteins [BR:
pbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GN234_12540 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QKS82725
UniProt:
A0A6N1CDK2
LinkDB
All DBs
Position
complement(2881609..2885130)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMSMPAVAVTDQNNMCSLVKFYKASMGAG
IKPICGADLWLSNKDPDAPLSRISLLVMNAVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGLIMLSAAKEGEIGLALLSGNPEEAETLARDWMSVFPDRFYIEVQRTNRPNDEEH
LHAAVALADKIGAPLVATNDVRFIKQEDFEAHETRVCIGEGRALDDPRRPKNYSDQQYLK
SAEEMAELFSDLPEALENTVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYDGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFQDEP
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYGNHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGELFKRHRGACPITMEYVRPDAKAV
LQFGEGWRIDPADALIQALRDQFGKDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacggtctg
gtgcggatcaagcccctggtcaagaccctggtgggcatgagcatgcctgccgtggcggtc
accgaccagaacaacatgtgttcgctggtcaagttctacaaggcctccatgggtgccggg
atcaagccgatctgtggggccgacctgtggctgtcgaacaaggacccggatgccccgctg
agccgtatcagcctgctggtgatgaacgccgtgggttatcgcaacctcaccgaactgatc
tcccgtggctttatcgacggccagcgcaatggttcgatcatcatcgagcgcgagtgggtg
gccgaggccagcgaagggctgatcatgctgtcggcggccaaggaaggtgaaatcggcctg
gccctgctcagtggcaaccccgaggaagccgagaccctggcccgtgactggatgtcggtg
ttcccggaccgcttctacatcgaggtgcagcgcaccaatcgtcccaacgacgaagagcac
ctgcatgccgccgtggccctggccgacaagatcggcgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggaagacttcgaggcccacgaaacccgtgtctgcatcggtgaa
ggtcgcgccctcgatgacccgcgacgtccaaagaactacagcgaccagcaatacctcaag
agcgccgaggaaatggccgagttgttcagcgacctgcccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgcaacatcgaagtgaagctgggcaagcacttcctgcccaacttc
ccgattcccgatggcatgaccatcgacgagtatttccgcaaagtgtccttcgacggcctg
gaggaacgcctcagcgtcctgctgcccaaggacaccactgaagattatgaagccaagcgc
caggtctatgtcgaccgcttgaatttcgagctggatatcatcatccagatgggcttcccc
ggctacttcctgatcgtgatggacttcatccagtgggccaagaacaacggcgtgccggtg
ggccctggccgtgggtcgggcgccgggtcgctggtggcctacgtacagaagatcaccgac
ctcgatccgctggaatatgacctgctgttcgaacgtttcctcaacccggaacgggtgtcc
atgcccgacttcgacgtcgacttctgcatggacggtcgcgaccgggtgatcgactacgtg
gccgagaaatacggtcgcaacgcggtgagccagatcatcacgttcggttccatggccgcc
aaggctgtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggtttggcggatcgt
ctgtcgaagatgatcccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgggacttcatcaaggtcgatgaagaagccgcggaaatctgggagatggcg
cgcaagctcgaaggcgtggtgcgtaacgtcggcaagcacgccgggggcgtggtgatcgcg
ccgaccaagctgacggacttctcgccgatctattgcgacgaagagggcgacggcctggtg
acccagttcgacaaggatgacgtcgaggcggcgggcctggtgaagttcgacttcctcggc
ctgcggaccctgaccatcatcgactgggccctgaagaccatcaaccgtgaccgggccaag
gtcggcgaagagccgctggacatcgccttcatcccgctggatgacaagccgacctacagc
ctgctgcaaaaagccgaaaccacggcggtgttccagctcgaatcccggggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacctgatcgcactggtggccctgttc
cgtccgggcccgttgcagtcgggcatggtggacgacttcatcaaccgtaagcacggtcgc
gccgaactggcgtatccgcatcccgactaccagtacgacggcctcaagccggtgctggcg
ccgacctacggcatcatcctgtaccaggaacaggtgatgcagattgcccaggtgatggcc
ggctacaccctcggtggcgcggacatgctgcgccgagccatgggtaagaaaaagcccgag
gaaatggccaagcagcgtggcggtttcattgaaggttgcgcgaacaacggtatcgatgcg
gacctggccggtaacatcttcgacctggtggaaaagttcgctggctacggcttcaacaaa
tcccactccgccgcctatggcctggtgtcctaccagaccgcgtggctgaaggcccattat
ccagcgccgttcatggccgcggtactgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcggaccatgaagctgcgcctcgacgcaccggacgtgaacgct
tcggagttcaagttcacggtgaacgacgaaggtcgcatcatctacggtctcggtgcgatc
aagggcgtgggcgagggcccggtggaggccatcaccgaagcgcgccaggacgggccgttc
aaggacctgttcgatttctgcgcccgggtcgacctcaagcgcatcaacaagcgcaccctc
gacggtttgatccgcagcggggcattggaccgcctggggccatacttccaggatgagccc
aaggcctaccaggctaacatcgaccgcaatcgcgcggtgttgctggcagccatggaagaa
gcgatcaaggccgccgaacagaccgcccgcacccacgatagcggtcacgccgacctgttt
ggcgggctgttcgtcgaagaggacgccgatgtctacggcaaccatcgcaaggccaaggaa
ctgaccctcaaggaacgcctcaagggtgagaaagacaccttgggcctgtacctcaccggg
cacccgatcgatgaatacgaaggcgagatccgccgcttcgcccgccagcgcatcatcgac
ctcaagccggctcgcgatacgcagaccgtcgccggcatgatcatcgccctgcgggtgatg
aagaacaaaaagggcgacaagatgggcttcatcaccctcgacgaccgctccgggcgcatc
gaggcttcgttgttcgccgatgcgttccactcggcgcaatcgctgctgcagaccgacgcg
atggtggtggtggaaggcgaggtcagcaatgatgacttttccggtggcctgcggctgcgg
gtcaagcgggtgatgagcatggaagatgcccgtaccaacctggccgagagcctgcgcctg
aagttgcagacccaggatctcaagggcgatcagctacgctggttgggcgaattgttcaag
cgccatcgcggtgcctgcccgatcaccatggagtacgtgcgccccgatgccaaggctgtg
ctgcagttcggcgagggctggcgaatcgatccggcggatgcgttgattcaagccttgcgt
gaccagttcggcaaagacaacgtcttcctccaataccgttga
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integrated database retrieval system
