Pseudomonas bijieensis: GN234_13600
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Entry
GN234_13600 CDS
T07266
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz02020
Two-component system
pbz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GN234_13600
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GN234_13600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbz03021
]
GN234_13600
Transcription machinery [BR:
pbz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GN234_13600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
RRP4_S1
DUF4741
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
QKS82924
UniProt:
A0A6N1CDB8
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All DBs
Position
3107006..3108499
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AA seq
497 aa
AA seq
DB search
MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNTD
PLADNVEQKTNTEIPEPSYQEAAPTVDNLEDGEWNERIPNELPVDTAWEDVYQTSASNLP
SSDDDEWDFTTRTSAGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEEI
LEAFDPELDIELDEIEAVLHRIQQFEPAGIGARNLGECLLLQLRQLSAKTPWLTEAKRLV
TDYIDLLGGRDYSQLMRRMKLKEDELRQVIELVQSLNPRPGSQIESTEPEYVVPDVIVRK
HNDRWLVELNQESVPKLRVNAQYAGFVKRADTSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELK
YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLM
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctagtcttgagaatgggccagcagctgacgatgacaccgcagctgcaa
caggccatccgcctgctccaattgtcgaccctggacctgcaacaggaaatccaggaggcc
ctggagtccaatccgatgctcgaacgccaggaagaaggcgacgacttcgacaacaccgat
ccgctggccgacaacgtcgagcagaagaccaacaccgaaatcccggaaccgtcctaccag
gaagccgccccgacggtggataacctcgaggatggcgaatggaacgaacgcatccccaac
gaactacccgtggacacggcctgggaagacgtctaccagaccagcgccagcaacctgccg
agcagcgatgacgacgagtgggacttcaccacccgcacctcggccggcgagagcctgcaa
agccacctgctgtggcaactgaacctggcgccgatgtccgacaccgatcgcctgatcgcc
gtgaccctgatcgattgcatcaacaaccagggctacctggacgagaccctcgaggaaatc
ctcgaagccttcgaccccgagctcgacatcgagctggacgagatcgaagctgtcctgcat
cgcatccagcagttcgagccagccggcatcggcgcccgcaacctgggcgagtgcctgttg
ctgcaactgcgccagttgtccgccaagacaccctggctgaccgaagccaagcgactggtc
accgattacatcgacctgctgggtggccgcgactacagccaactgatgcgtcgcatgaag
ctcaaggaagatgagctgcgccaggtcatcgaactggtgcagagcctcaacccacgcccc
ggctcgcagatcgaatccaccgaacccgaatacgtggtccccgacgtgatcgtgcgcaag
cacaacgatcgctggctggtggagctcaaccaggagtcggtgcccaagctgcgggtcaac
gcccagtacgccggattcgtgaaacgcgccgacaccagcgccgacaacaccttcatgcgc
aaccagttgcaggaagcgcgctggttcatcaagagcctgcaaagccgcaacgaaaccctg
atgaaagtggccacccagatcgtcgagcatcagcgcggcttcctggagtatggcgacgaa
gcgatgaaaccgctggtcctgcatgacattgccgaggcagtgggcatgcacgagtcgacg
atttcccgggtaaccacccagaaattcatgcatacccctcggggcatctatgaattgaaa
tactttttctccagccacgtcagcacctccgaaggcggcgaatgctcgtccacggccatc
cgcgcgatcatcaaaaaactggtggccgcggaaaatcagaaaaagccgttgagtgacagc
aagatcgctggtttactggaggcacaaggcattcaggtggcccgccgcaccgtcgccaaa
taccgcgaatccctcgggatcgcgccttcgagcgaacgcaagcggttgatgtaa
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