Pseudomonas bijieensis: GN234_13970
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Entry
GN234_13970 CDS
T07266
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GN234_13970 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbz03019
]
GN234_13970 (pnp)
03016 Transfer RNA biogenesis [BR:
pbz03016
]
GN234_13970 (pnp)
Enzymes [BR:
pbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GN234_13970 (pnp)
Messenger RNA biogenesis [BR:
pbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GN234_13970 (pnp)
Transfer RNA biogenesis [BR:
pbz03016
]
Prokaryotic type
tRNA degradation factors
GN234_13970 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QKS82989
UniProt:
A0A6N1CCJ0
LinkDB
All DBs
Position
complement(3195145..3197250)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQAEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccaattcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgta
ttggtgaccgttgtcggtgccaagcaagccgatccaggcaagggctttttccctctgtct
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttccctgaaggtttcatgaacgaagtgcaggttgtctgcaccgtcgtgtccacc
agcaagaaaaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattcctttcgatggcccgatcggcgctgcccgcgtcgcgttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactgaaggcatcgagcctggacatggtcgtg
gccggtacttccgaagccgtgctgatggttgaatccgaagccaaggaactgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgagttccaggtggtgatcaacgccgtc
aaggaactggccgccgaagccgccaagccaacctggacctgggctccacaagccgaagcc
accgaactgctgggcgcgatccgtgccgagttcggcgaagcgatctcccaggcctacacc
atcaccgtcaaggccgaccgttatgcacgcctgggtgagctgaaagaccaggtcgttgcc
aagctgtccggcgaagaaggccagccatcggccagcgacgtcaaagccgctttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccgcgtatcgacggtcgc
gacactcgcaccgtgcgtccgctgaacatcgaagtcggcgtcctgccgaagacccacggt
tcggcactgttcacccgtggcgagacccaggccctggtcgttgccacactgggcaccgcc
cgtgacgcgcaactgctcgacaccctggaaggcgaaaagaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgccggtcgccgc
gaaatcggccacggtcgtctggcccgtcgttcggtccaggccatgctgcctgccgctgat
gtgttcccgtacaccattcgcgtggtctcggaaatcaccgagtccaacggctcgagctcg
atggcttcggtctgcggcgcttccctggccctgatggacgccggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtgaaggaaggcgagaaattcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtggccggtaccgcc
aagggcgtcaccgcactgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgccctgggccaagccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggtcagtctcgcaccgagctgtcggaaaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgaccatccgtgcgatc
tgtgaagaaaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggcagaagcagcacgccagcgcgtcctgggcatcactgccgaagcc
gagattggcaagatctacgtcggcaaggttgaacgcatcgtcgacttcggcgccttcgtc
aacatcctgccgggcaaggacggtctggtccacatctccatgctgagcgatgctcgcgtc
gagaaagtgaccgacatcttgaaagaaggccaggaagtggaagtgctggtgctggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagcagccaaggcatcgggc
gtttaa
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