Pseudomonas bijieensis: GN234_18725
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Entry
GN234_18725 CDS
T07266
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz02025
Biofilm formation - Pseudomonas aeruginosa
pbz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GN234_18725 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
GN234_18725 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbz02044
]
GN234_18725 (tssH)
Secretion system [BR:
pbz02044
]
Type VI secretion system
Imp/Vas secretion system core components
GN234_18725 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
AAA_16
NBD_SMAX1
ClpB_D2-small
NACHT
Clp_N
TniB
nSTAND3
AAA_7
Sigma54_activat
AAA_29
AAA_30
AAA_33
SRP54
bpMoxR
Mg_chelatase
Hpr_kinase_C
SLFN-g3_helicase
GAS
ENOX1
Motif
Other DBs
NCBI-ProteinID:
QKS83866
UniProt:
A0A6N1CHL0
LinkDB
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Position
4306489..4309074
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AA seq
861 aa
AA seq
DB search
MINVDLQQLIQALDAETRSDLERSAEQCIARGADKVLVEDLMLGLLERPQGLLARALQDA
QVSAGELSAALQPRMGHSASRNPVFAPALVQWLQDALLVANLELGLSQVGQAALILALLR
NPLRYAGSAYHALLTRLNIDRLKDFALSQQAQPVADQTAKPGDSLLARFTHDLTRQAREG
QLDPVLCRDGEIRQMIDILVRRRKNNPIVVGEAGVGKTAIVEGLALRIAAGEVPSVLEDV
ELLSLDMGLLQAGAGIKGEFERRLKGVIDEVKTSPKSIILFIDEAHTLVGAGSSAGAADA
ANLLKPALARGELRTIAATTWTEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAR
VYENSHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPQSLERI
RSELAEGERQRQALRRDGQAGLSIDLQALEALEARLEAIEDECRALETQWTEQRILAQRL
LSLRQQLARARESEQDQTHGVEALEAALHETHGTLVAAQAQERLVSFEVCPRLVAEVISA
WTGVPLAQLAREHNLKVASFAADLRARIRGQEPAVQALDRAMRAAAAGLNKPDAPVGVFL
LVGPSGVGKTETAHALADLLYGGDRFITTLNMTEFQEKHTVSRLIGAPPGYVGFGEGGML
TEAVRKKPYCVVLLDEIEKADPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGS
ERIDELCENGAHPSAESLEESIRPILSKHFKPALLARMCVVPYYPVSGPVLRELVTIKLD
RMGERLRRRHLGFSYCGQLVNHLVARCSRNDRGARLIDQLLDLHLMPLVADRLLAAMAGD
EQLRHVHAVLNGDASIACEFS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagaccttcagcaactgattcaggcattggacgccgaaaccaggagcgat
ctggagcgctcggccgagcaatgcatcgcgcgtggcgcagacaaggtcctggtggaagac
ttgatgctgggcttgctggagcgtccgcaaggcctgctcgcgcgagccttgcaagatgcc
caggtcagcgcgggtgaactgagcgccgccctgcaaccacggatggggcacagtgcttcg
cgcaacccggtattcgccccagcgctggtgcaatggttacaggatgccctgctggtggcc
aatctcgagctgggccttagccaggtcggacaagccgcgttgatcctggcgttgctgcgc
aacccgcttcgttacgcagggagtgcttatcatgcgctgctcacccggctgaatatcgat
cggttgaaagatttcgccttgtcgcaacaggctcaaccggtcgccgatcagaccgccaaa
ccgggcgactccctgctggcgcgctttacccatgacctgactcggcaggcccgcgaaggc
cagctcgacccggtgctttgtcgcgacggtgaaatccggcagatgatcgatatcctcgtt
cgtcgccgcaagaacaacccaatcgtggtcggtgaggctggagtgggcaagaccgccatc
gtcgaggggctggcgttgcgcatcgccgcaggggaagtaccgtcagtgctcgaagatgtc
gagctgctttcgctggatatggggctgctgcaggccggcgccggcatcaagggtgaattc
gagcgtcgtctcaagggggtgatcgacgaggtcaagacttcgccgaaatccatcattctg
ttcatcgatgaggcccacaccttggttggtgcgggcagcagcgcgggggccgccgatgcg
gccaacctgctcaagccagccttggcccggggcgagctgcgcacgatcgcggccactacc
tggaccgagtacaaaaaatactttgagaaagacccagccctggcccgtcgtttccaaccg
gtgcaattgcacgagcccactgtcagcgaggcggtgaccatcctgcgtggcctggcccgc
gtctacgagaacagtcacggcatttacctgcgtgatgacgcggtggtcgcggcggcgcaa
ttgtcggcccgctacctggctggtcgtcagttgccagacaaggctgtggatgtactggac
accgcctgcgctcgcgtacgcatcagcctggccgctgcgccgcaaagcctggagcgaata
cgcagcgagctggccgaaggcgagcgtcagcgccaggcgctgcgccgtgatgggcaggcc
ggtttatcgatcgatcttcaggcgctagaagcgctggaggcccgcctggaggccatcgaa
gacgagtgccgagcgctggaaacccaatggaccgagcaacgtattcttgcgcaacgcctg
ttgtcgcttcgtcaacaattggccagggcacgggaatccgagcaggatcaaacccacggt
gtcgaagccctggaagcggcgctgcatgaaacacacggcacgttggtggctgcgcaggct
caggagcgcttggtcagcttcgaagtttgcccgcgactggtcgccgaggtcatcagtgcc
tggaccggtgtaccgctggcgcaactggcccgagagcacaatttgaaagtcgccagtttc
gcggcggacctgcgtgcgcgtattcgtggtcaggagccagctgtacaggcgcttgatcgc
gcgatgcgtgccgccgccgcaggcctgaacaaacccgacgccccagtgggcgtgtttctg
ctggtggggcccagtggcgtcggcaagactgagacggcgcatgccctggccgacttgctc
tatggcggtgatcgtttcatcaccacgctcaacatgactgaattccaggagaaacatacc
gtttcgcggttgatcggcgcaccgccgggctacgttggttttggcgaaggtggcatgctc
accgaagccgtgcggaaaaagccttattgcgtggtgctgctcgatgaaatcgaaaaagcc
gacccggatgtgttgaacctgttctaccagatattcgacaaaggcttggccaacgatggg
gaagggcgggagattgattttcgcaataccttgattctgatgacgtcgaacctgggcagt
gagcgcatcgacgaactgtgcgaaaacggcgcacacccgagcgccgaaagcctcgaagag
tccattcgcccgatcctcagtaaacatttcaaacccgctctgttagcccgcatgtgcgtg
gtgccgtactacccggtcagcgggccggtgttgcgtgagctggtgacgatcaaactcgac
cgcatgggcgagcggctgcgccgtcgtcacttgggcttcagttactgcggccaacttgtg
aaccatctggtcgcgcgttgcagtcgcaatgatcgcggcgcacgactgattgaccaactg
cttgacctgcacctgatgccgctggttgccgaccggttgctcgcggccatggccggcgac
gaacagctgcggcatgtacacgccgtgctcaacggcgatgccagcattgcgtgtgagttc
tcctga
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