Pseudomonas bijieensis: GN234_18915
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Entry
GN234_18915 CDS
T07266
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz02025
Biofilm formation - Pseudomonas aeruginosa
pbz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GN234_18915 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
GN234_18915 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbz02044
]
GN234_18915 (tssM)
Secretion system [BR:
pbz02044
]
Type VI secretion system
Imp/Vas secretion system core components
GN234_18915 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_10
T7_gp14
nSTAND_NTPase5
Bax1-I
Motif
Other DBs
NCBI-ProteinID:
QKS83903
UniProt:
A0A6N1CQZ8
LinkDB
All DBs
Position
4354929..4358429
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMTRWVIPLLGLIALSLIIWFVGPLLDWLVPEGRRWALIILVFAVWIAYRVFRI
IQARRQAAEVMRSLAAQTPPDPTSIATAEELETLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSDATIDKAAWLGFLGLLKKQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEYFDTLSKEERAQVWGMTFALDDGKSNDSP
LAHLQSEFTGLEQRLNDRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIEKLFTAV
AFAERGLVGVDPKVERRRKWIARGVLASTVVLVLVVSTLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDVLAVLPLLNAVKHLADDAPSWAEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLLTRIEEQLHSGGNSDFLYEGLKAYLMLADTEHYDADFIKAWIALDWDRSLPRD
LPAEQRQALTAHLQALFERRPPLARLDPRLVEDLRRQLQQLPVAQRVYDRIKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTVKGYRQGFLLTSLSQTGTLAEEQWVL
GHEEADQQNVASLAADVRRLYFQDYLRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQQDERLLAAQGAPVEGGVDKLKERLGSLLGQEQATQNAPAQSDDPI
TAHFAELNSIVSKSEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQATAAATR
VSLNAERQPPLVQGLVKSVVNSTTNSMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTPTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPMVRFELKPVAMDSTITQFLLDLDGQQLSYDHGPSRPTAMQWPN
PGSIGVVRISIMPPSSSGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASAS
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttatgacccgctgggtcattccgttgctggggctgatcgcc
ctgagcctgatcatctggttcgttggcccgctgctcgattggctggtgcccgaaggccgg
cgctgggccttgatcatcctggtgtttgcggtgtggatcgcctaccgggtgttccgcatt
atccaggcgcgccggcaggccgccgaagtgatgcgcagcctggccgcgcaaactccgccc
gatcccaccagcatcgccaccgccgaagagctcgaaaccctgcgccagcgcatggacgaa
gccctggccctgctcaagaaagccaagctgggcggtgatgagcggcgcaacctctacgag
ttgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaac
tcggggctgcatttcccgctggccgcgcaactgggcgccggtgcggtacgcggcgtcggc
ggtacgcgcaattgcgattggtggttcaccgaccaggctgtcctgctcgacaccgccggc
cgctacaccacccaggacagtgacgcgaccatcgacaaagccgcgtggctgggtttcctt
ggcctgctgaaaaaacaacgggcccggcgcccgattgacggtgcgtttatcgccatcagc
ctgtccgacctgttgctgggcagcgacgccgaacgtgccgcccatgccgcggcgattcgc
ttgcggatccaggagctgtacacccaattgggcgtgcgtttcccgatctacctgatgctg
accaagctcgacctcgtgcccgggttcatggagtacttcgataccctgagcaaggaagag
cgcgcccaggtctggggcatgacctttgccctggacgatggcaagagcaacgacagcccg
ctggcgcacctgcaaagcgaattcaccggccttgagcagcgcctcaacgaccgtctggtg
gaacgtctgcaacaagagcgcgacccggcgcggcgcgacctgatctacggcttcccgcag
cagttcggtgccttgaaagattgcctgcaaagcttcctcgaaggcgtgttcaaacccaac
gctttcgaagagcgcgtgttgctgcgcggcgtgtatttcaccagcggcacccaggaaggc
agcccgatcgatcgcctgatcggctccatggcccagagcatgaacctggaccgtcagcac
ctggcacgccagaccggcaccgggcgcagttacttcatcgaaaaactcttcaccgccgtg
gcgttcgccgagcgcgggctggtgggcgtcgatccgaaagtcgagcgtcggcgcaaatgg
atcgcccgcggtgtgctggcttccaccgtggtgttggtgctggtggtcagcacgttgtgg
tgggtcagctatcgcgccaaccaggcctacatcgcccaggttgaccagaaagtcgcacct
ctggggcaaaccgtgcagaacctcagcccggcgcaacgggatgtgctcgcggtgctgccg
ttgctcaacgctgtgaaacacctggccgacgacgccccgagctgggccgaaggcctgggc
ctgtaccagggcgacatgctcgaagccgagtctggcagcgtctaccgcaagctgctgatc
gccgtgttcgccccacgcctgctgacgcgcatcgaagagcaactgcacagcggcggcaat
tcggacttcctctacgaaggcttgaaggcctatctgatgctcgccgacaccgagcattac
gatgccgacttcattaaggcctggatcgccctggattgggaccgcagcctgccgcgcgac
ttgccggccgagcagcgccaggccctgaccgcgcatttgcaggcactgttcgagcggcgt
ccgccgctggcgcgcctcgacccgcgcctggtcgaagacctgcgccggcagttgcagcaa
ttgccggtggcccaacgtgtgtatgaccggatcaaacgccagaaactgcctgaaggcatc
ccggacttccgcatcaacgaagccgccggacgtgacgccgcgctggtgttcagccgtaag
agcggcaagccgttgggtgagccgctgagcgggttcttcacggtcaagggctatcgccag
ggcttcttgctcaccagcctgagccagaccggcaccctggccgaagagcaatgggtgctg
ggccacgaagaggccgatcagcagaacgtcgccagcctggccgccgatgtacgtcgcctg
tatttccaggactacctgcgccaatgggacgccttgctggccgacatcgattttgtgccg
atcaccagtgtggcccaggccgccgatgtgttgcgggtgatttccggcccgacctcaccg
ttgaaaaagctgttggtggcggtggcgaaggaaaccgacctgcaacaggatgaacgcctg
ctggccgcccaaggtgcgccagtggaaggcggtgtggacaagctcaaggagcgcctgggc
agcttgctcggccaggagcaggcaacgcaaaacgcaccggcgcaaagcgatgacccgatc
accgcgcacttcgccgagctcaacagcattgtcagcaaaagcgaaggcgaaccagcggcc
atcgacggcttgctggcggacatgaacgccctgtacgtgcaggtcagcgccatggtcggt
gccagtggcgacgccttgctcggcgaagccaagaaccaggcaacagccgccgctacgcgc
gtcagccttaatgccgaacgccagccgccgctggtgcagggcctggtcaagtcggtggtc
aattccaccaccaacagcatgatgggcggggtgcgcaatcaactgaacgccgcctggacc
agtgaagtggtgaacatctatcgccagtccctggccgggcgctatccgatgtcgccgggc
agtgcgcgggacgccaccctcgatgactttggtcagttcttcggcgttggcggggtgatg
gacaactacttccgcaagtacctgcagccctacgtcgacacatcgaccccgacctggcgc
tggcagccgggcgcggcgcagaagctcggcatcgcccctggcgtgctgcagaccttccag
cgcgcggcgaccattcgcgatgcgttcttccgttccggcggcacgcagccgatggtgcgt
ttcgagctcaagccagtggcgatggactcgaccatcacccagttcctgctcgacctcgac
ggccaacaactgagctacgaccacggcccgagccgcccgaccgccatgcaatggcccaac
ccgggcagcatcggcgtggtgcggatctcgatcatgccgccgtcgtccagcggtcgctcc
ggcatcaccctggacgggccgtgggcctggttccggctgctggagcaatcggacctgacc
gccggcaactcgccggatcgcttcaacctgcggctgcgggtcgatggcgccagtgcctct
tacgagttgcgggccaacagcgccttcaacccgttcaagagccgggtgctcagcggcttc
agcctgccggagcggctatga
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integrated database retrieval system
