Pseudomonas bijieensis: GN234_19500
Help
Entry
GN234_19500 CDS
T07266
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GN234_19500 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbz03021
]
GN234_19500 (rho)
03019 Messenger RNA biogenesis [BR:
pbz03019
]
GN234_19500 (rho)
Transcription machinery [BR:
pbz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GN234_19500 (rho)
Messenger RNA biogenesis [BR:
pbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GN234_19500 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
QKS84012
UniProt:
A0A6N1CHT2
LinkDB
All DBs
Position
4482614..4483873
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLELAEQMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
FDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANIARNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLVDKLKTTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagccgattaccgaactgctcgaattggccgaacag
atgggcatagaaaatatggcccgttcgcgcaagcaggacgtgattttctccctgctcaag
aagcacgcgaaaagcggcgaggaaatctccggtgatggcgtgctggagattctccaggac
ggcttcggcttccttcgctccgcagacgcttcctatcttgccggcccagacgatatctac
gtctcgccgagccagatccgtcgcttcaacttgcgcaccggtgacaccatcgttggcaag
atccgccctccgaaggaaggcgagcgctacttcgcactgctcaaggtcgacaccatcaac
ttcgaccgtccggaaaacgcgaagaacaagattctcttcgagaacctgaccccgctgttc
ccgaccgtgcgcatgaagatggaagccggcaacggttccaccgaagacctcaccggtcgt
gtcatcgacctgtgcgcacccatcggcaaaggccagcgcggcctgatcgtggcgccgccg
aaggcgggcaagacgatcatgctgcagaacatcgcggccaacatcgcccgtaacaaccct
gaagttcacctgatcgtgctgctgatcgacgagcgtccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtcgcctcgacgttcgacgagccgccgacccgccacgtg
caggttgccgaaatggtgatcgagaaggccaagcgcctggtcgagcacaagaaagacgtg
gtgatcctgctggactccatcacccgtctggcccgtgcctacaacaccgtgatcccgagc
tccggcaaggtgctgaccggtggtgtcgatgcccatgcgctggaaaaaccgaagcgtttc
ttcggtgccgcacggaacatcgaggaaggcggttcgctgaccatcatcgccaccgcgctg
gttgaaaccggttcgaagatggacgaagtgatctacgaggaattcaagggcaccggcaac
atggagctgcctctggatcgccgtatcgccgagaagcgtgtgttcccggccatcaacatc
aaccgttccggtacgcgccgcgaagagttgctgaccgccgacgacgagttgcagcgcatg
tggatcctgcgcaagctgctgcatccgatggatgaagtcgccgccatcgagttcctggtc
gacaagctgaagacgaccaagaccaacgatgagttcttcctgtcgatgaaacgcaagtaa
DBGET
integrated database retrieval system
