Pseudomonas bijieensis: GN234_21860
Help
Entry
GN234_21860 CDS
T07266
Name
(GenBank) RHS repeat protein
Organism
pbz
Pseudomonas bijieensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
RNAse_A_bac
DUF6531
RHS
OCRE
Motif
Other DBs
NCBI-ProteinID:
QKS84441
UniProt:
A0A6N1CXF1
LinkDB
All DBs
Position
4987902..4992695
Genome browser
AA seq
1597 aa
AA seq
DB search
MFAPDKLLALNNTIGLLVVAAMDPEQPDVDAVFQDFRACLNDYDAWAESFWAGWALDLEQ
VFKVGNEVSLAAPKNQHTPVSATVVTCPAGGPLTLVHMFQAVRFVPIGDTPVMLEPVIEG
APGQETFGEPIHHVIGPSGILEVPECWRGQRYRITFFPHVTADHVKALYASYQGVIDELE
GWLKAEWEQFQPLWAEFSDAGFLERYGVLQRADWRGFENALHQLWDDVKQVFELLADLQA
NSEKLLEYLTRVELEQLLKASSEAIARGLMVLSDEPLLFIHMAAFASWLRMLPPQYLAEI
VGELRASVLINFLLMRLTGGLGLGLRMSGKVLGQVRSERAREWLLASSLRLGQLSPDRLN
QHADVLKPLVVSQRAPLKPTPVGPLHITPEHSAPLSVSNPAAVAREKSQGATRLSKYEPH
DDAPTQSKNPNGDSADTAAQTQTSGCPVSMVTGEELLTLDDGTLDGRLPFVFTRLYRTSA
ADLDVGLGRGWSHALAHRLELDGEQVIWVDQENRRTTFPLPNAQRPAIHNSLARAAIYLG
TEPDELIVAQAGADAAFLHFRDGHLVALSDRHDNRLTVQRNIHGDISRLDNGAGRALRLR
YEQRHLVAVDYQSFHPAITLDEAWRTEQTLVTYRYDGRFRLIEATNAAGESERYDYDDRH
VILQRQLAGGASFYWEWQGLGAASRCVRHWASFAQMDSRYTWGKDGSVTVRHLDGSQEVY
VHDDRARLLRKVEPDGGEHLKAYDEQGRLIAEQDPLGAVSEYRYDEVGRLVALMPADEVP
TSYEYRNGFLHARSRGQAVWTYRRNARGDVIVSIDPDGRRTEYAYDGHGQLLARYDPDGG
EHRFAWSRLGQLTEEILPDGGRRCFSYDALGRLLSRKDEHGALTHYRWDAVGRLLQVTLP
SGATRTWSYNAYGKVTAERDEQGRLTRYEYADDLHLVSRRLNPDGSELKYRYDSARLLLT
EIENESGEKYQLDYTPNGLIRQQVGFDGQRTTYAYDLNGHLREKTEHGEDGSQWVTRYQR
DAAGRLRVKTLPDGQAIEYRYDELGRLVHVNDGSNRPLAFEYDAQDRLVGEHQGWGTLRY
RYDACGRLNHLRLPDDSQLDYHHAPGGALTAIDLNGSRLTEHRFDGGRERQRQQGRLLSD
YAYDEQGRLKAQTVWQNPQQQLFWRDYAYSPRGNLQTLSDNRSRRCYQYDPLDRLTRIDF
SHSEPPEHFCHDPAGNLMMQDRPGPTTLKGNRLLKEGDRHYDYDAFGNLIRERRGQALVS
AYRYDSQHRLIGVTTADGRETSYRYDAFGRRISKTVDGLTTEFFWQGDQLVAENSPRHHR
SYVYEPGTFRPLAMLDGEGLNACPFYYHLDHLGTPQELTSYSGQIVWSARYNGYGKLTEL
KHGGGEQLEQPLRFQGQYFDPESGLHYNRHRYYNPETGRYLTPDPSKLAGGLNGYRYTLN
PTGWVDPLGLACQCPGDIEADGPFSEIVPGGGLAAHEARGGHLIEKHIGRSEAQLRKRLH
SEPHVPTASTFPDRAAAESTVSSVLRAKAKDIDEFLAEKNEKRLLLQQTFPSPVGVGVIR
KSGKLEPLSVVTLVLRKSKESPVGYNLLTGYVEKNGK
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccccgacaagctcctggccctgaacaacaccattggcttgctggtggtggcg
gccatggaccccgaacagccggatgtcgatgcggttttccaggattttcgggcctgcctg
aacgactacgacgcctgggctgaaagcttctgggccggttgggcgctggatcttgagcaa
gtgttcaaggttggtaacgaggtgtctctcgcggcaccgaaaaaccagcacacacccgtc
agcgccacggtggtgacctgcccggcgggtgggccgctgacgctggtgcacatgttccag
gcggtgcgctttgtgccgatcggcgatacaccggtgatgctggagccggtcatcgaaggc
gcgccggggcaggaaaccttcggcgagccgatccaccacgtgatcggccccagcggcatc
ctggaagttcctgagtgttggcggggccagcgttatcgcatcaccttttttccccatgta
acggccgatcacgtcaaggcgttgtacgcgtcttaccaaggcgtgatcgatgaactcgag
ggttggctgaaagcggagtgggagcaatttcaaccgctgtgggcggagttttccgacgcc
ggctttcttgaacgctacggcgtattgcagcgagccgattggcgcggcttcgaaaacgcc
ctgcatcagctgtgggacgacgttaaacaggttttcgagctgctggccgatctgcaggcc
aacagcgaaaagctgttggagtacctgacccgcgtcgagcttgaacaattactgaaggct
tcctctgaggcaatcgccagagggttgatggtgttgagcgacgagccgttgctcttcatc
cacatggcggcgttcgccagttggctacggatgttgccaccccagtacctggctgaaatc
gtcggggagctgcgcgcttcggtattgatcaatttcctgctgatgcgtttgaccgggggg
ctgggcctgggtcttcgcatgagcggtaaagtcttgggccaggttcgctcggagcgggcc
cgggagtggttgctggcgtcgagcctgagattgggtcaactcagccccgaccggctcaat
caacatgccgatgtgctcaaaccattggtggtcagccagcgtgcgcctttaaaaccgaca
cctgtcggacccttgcacatcacccctgaacattctgcaccactgtccgtcagcaacccg
gccgctgtagcgcgggaaaagtctcaaggggccacccggctaagcaaatacgaaccccac
gacgacgccccaacccaatcgaaaaaccccaatggcgacagcgccgataccgcggcccag
acccagaccagcggctgcccggtgtcgatggtcaccggcgaagaactgctgaccctcgac
gacggtaccctcgatggccgcttgccgttcgtcttcacccgtttgtaccgcaccagcgcc
gccgacctggacgtcgggctcgggcgcggctggagccatgccctggcccatcgcctggag
ctcgacggcgagcaggtcatctgggtcgaccaggagaaccggcgcaccacctttccactg
cccaacgcccagcgtccggcgatccacaacagcctggcccgggcggcgatctacctcggt
accgagccggacgaactgatcgttgcccaagccggtgcggacgccgcgttcctgcacttt
cgcgacggccacctggtggccctcagcgaccgccacgacaaccgcctgacggtccagcgc
aacatccatggcgacatcagccgcctggacaacggcgccggccgcgccctgcgcctgcgt
tacgagcagcgtcacctggtcgccgtcgactaccagagcttccacccggccatcaccctc
gacgaagcctggcggaccgagcagacgctggtgacctaccgctacgacggacgtttccga
ctgatcgaagcgaccaatgccgccggcgaaagcgaacgctacgactacgacgaccgacac
gtcatcctccagcggcaactggccggcggggcgagtttctactgggaatggcaaggcctc
ggggcggcgtcccgctgtgtccggcattgggcctcgtttgcgcagatggacagccgctac
acctggggcaaggacggcagcgtcacggtccggcacctggatggcagccaggaagtttac
gtccacgacgaccgggcgcggctgctgcgcaaggtcgagcccgacggtggcgagcacctc
aaggcctatgacgaacagggccggttgatcgccgaacaggacccgctgggggcggtcagc
gaataccgctacgacgaagtcggacggctagtggcgctgatgccggcggacgaagtgccg
acgtcctacgaataccgcaacggtttcctgcacgcccgttcccgtggccaggccgtgtgg
acctaccggcgcaatgcccggggcgatgtgatcgtgagcatcgatccggatggccgacgc
acggaatatgcctacgacggccacgggcaactgctggcgaggtatgacccggacggcggc
gaacatcggttcgcctggagtcgcctgggccaactgaccgaagagatcctgcccgatggc
gggcgtcggtgtttttcctacgacgccctgggacgtttgctcagccgcaaggacgaacac
ggcgccctcacgcattaccgatgggacgccgtcggccgactgctgcaagtgaccttgccc
agcggcgccacccggacctggagctacaacgcctacggcaaggtcaccgccgagcgcgat
gaacagggccgcctcactcgctacgaatacgccgacgacctgcacctggtcagccgtcgc
ctgaaccccgatggcagcgaactgaaataccgctacgactcggcgcggctgctgctgacc
gagatcgaaaacgaatccggcgaaaaatatcagctggactacacgcccaacggcttgatc
cgacagcaagtcggcttcgacggccaacgcaccacctacgcttacgacctcaacggccac
ttgcgggagaaaaccgaacacggcgaggacggttcgcagtgggtcacccgctaccagcgt
gacgcggccgggcggttgcgggtcaagaccttgcccgacggccaggccatcgagtaccgc
tacgacgaactgggccggttggtccacgtcaacgacggcagcaatcgtccgctggccttc
gagtacgacgcccaggaccggctggtcggcgagcatcagggctggggcaccctgcgttat
cgctacgacgcctgcgggcgcctcaaccacctgcgcttgccggacgacagccagctcgac
taccaccatgcccccggtggcgcgctgaccgccatcgacctcaacggttcgcgcttgacc
gaacaccgatttgacggcggtcgcgaacggcaacgccagcagggccggctgctcagtgac
tacgcgtacgacgaacagggccgcctcaaggcccagaccgtgtggcagaacccacagcag
caactgttctggcgcgattatgcctacagcccccggggcaacctgcaaaccctttccgac
aaccgcagccggcgttgctaccagtacgacccgctggatcgcctgacccgcatcgacttt
tcccacagcgagccgccggaacacttctgccatgacccggccggcaacctgatgatgcag
gaccgccccggcccgaccaccctcaagggcaaccgcctgctcaaggaaggcgaccgccac
tacgactacgacgccttcggcaacctgattcgcgagcgccgcggccaggccctggtcagc
gcctaccgctacgacagccaacaccgcctgatcggcgtcaccacggcggacggccgcgaa
acgtcctaccgctacgacgccttcggccgacgcatcagcaaaaccgtggacggcctgacc
acggagtttttctggcagggcgatcagttggtcgccgaaaacagcccgcgccaccaccgc
agctacgtctacgaaccaggcaccttccgcccactggcgatgctcgacggcgaaggcctg
aacgcctgcccgttctactaccacctcgaccacctgggcacgccccaggaactgaccagt
tacagcggacagatcgtctggtcggcgcgctacaacggctacggcaaactcactgaactc
aagcacggcggcggcgaacaactggagcaacccctgcgcttccagggccagtacttcgac
ccggaaagcggcctgcactacaaccgccaccgctactacaatcccgagaccggccgctac
ctcacacccgacccgagcaaactggcgggagggctcaatgggtatcggtacaccctgaac
ccgacggggtgggtggatccgttggggttggcctgtcagtgtcctggtgatattgaggct
gatgggccgttcagcgagattgtgccgggaggaggtttggctgcgcatgaggctcgcggt
gggcatttgatagaaaagcatataggtcgctctgaagctcagttaagaaagcgccttcat
tcagagcctcatgtgcctaccgcgtcgacattcccagatagagcagcggcagaatcaacg
gtctccagcgtactaagagcaaaagcaaaagacattgatgagtttcttgcggaaaaaaat
gaaaagagacttcttttacaacaaacctttccttctccagtgggagtcggggttatccgg
aaaagtgggaagttagagcctctatcggtcgtgacgttggtgcttagaaaatccaaggaa
tcacctgttggatacaatttgcttacggggtatgttgaaaaaaatggaaaataa
DBGET
integrated database retrieval system
