Pseudomonas bijieensis: GN234_23225
Help
Entry
GN234_23225 CDS
T07266
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbz
Pseudomonas bijieensis
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_23225 (phrB)
Enzymes [BR:
pbz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GN234_23225 (phrB)
DNA repair and recombination proteins [BR:
pbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GN234_23225 (phrB)
Prokaryotic type
GN234_23225 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKS84681
UniProt:
A0A6N1CY20
LinkDB
All DBs
Position
complement(5288278..5289729)
Genome browser
AA seq
483 aa
AA seq
DB search
MQLIWLRSDLRLHDNTALAAAAAQGPCVAVYLTSPEQWRAHDDAPCKIDFWLRNLGALSA
ALDELNIALLIRDAAHWHHAPEVLLKLCRELNVGAVHVNEEYGLNETRRDAEVARALNDQ
GIEFHSHLDQLLFKPGSVLTKTGNYFQVFSQFRKVCYSRLHFSLPSLVATPLRQAPTGIA
RDPVPTQVAGFPPPSEALRALWPAGETEARRRLDTFVDQHIDDYQNERDFPARPGTSQLS
AYLVAGVVSPRQCLHAALQANQGEFESGSAGTVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWREAPAELEAWKQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSASTGTDSAPWFRIFNPMSQSEKFDREGLFIK
RWLPGLNDLNSQQVHSPNTQGGLFGAVDYPAPIVDLRESRARALAAFRNLPARQDAGTEG
MGD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgcctgcacgacaacaccgccctggcggcg
gcagcggcccagggcccatgcgtggcggtgtacctgaccagccccgaacaatggcgcgcc
catgacgatgcaccgtgcaagatcgatttctggctacgcaacctcggcgcgttgagcgcg
gccctggacgaattgaacattgcgctgctgatccgcgacgcagcgcattggcaccatgcc
ccagaagtgctgctcaaactgtgtcgcgagctgaacgtcggcgccgtgcatgtcaacgaa
gagtacggcctgaatgaaacgcgacgcgacgccgaggtcgcccgcgccttgaatgaccaa
ggcattgaatttcacagccatctcgaccaattgctgttcaagcccggcagcgtactgacc
aagaccggcaactatttccaagtgttcagccagttccgcaaggtctgctacagccgcctg
catttctccttgccgagcctggtcgccacaccgctccggcaggctcccaccggcattgcc
cgtgatccggtgccgacgcaagtcgctggattccccccacccagcgaagcgctacgcgcc
ctctggcccgctggcgaaaccgaagcccgtcggcgcctggacacctttgtcgaccaacac
atcgacgactaccagaacgaacgggactttcccgccaggccgggcaccagccagctatcg
gcctatctggtggcaggggtggtgtcgccgcgtcagtgcctgcacgccgcgctacaagcc
aaccagggtgaattcgaaagcggaagtgccggaacagtgacctggatcaatgaactgctc
tggcgcgagttctataaacatattttggtgggctatccacgcgtgtcgcgccatcgcgcc
tttcgcccggaaaccgaggcgctggcgtggcgcgaggcccccgcagaactggaggcatgg
aagcaagcacgcaccggcctgccgattatcgatgcggccatgcgccagttgctggagacc
ggctggatgcacaaccgtttgcggatggtcgtggcgatgttcctgaccaagaatctgttg
atcgattggcgcgaaggcgagcgctttttcatgcagcacttgatcgacggcgacctggcc
gccaacaatggcggctggcagtggagcgcctccaccggcaccgattcggcgccctggttc
cgcatcttcaacccaatgagccagtcggaaaaattcgatcgcgaaggcttgttcatcaaa
cgctggttgcctggactgaacgatctgaacagccaacaggtccatagcccaaatacccag
ggcggcttgtttggcgcagtggattatccggcaccgatcgtcgatttgcgcgaatccagg
gcgcgtgcgctggcagcgttcagaaacctgccagcgcgccaggatgcaggtactgaaggg
atgggcgattag
DBGET
integrated database retrieval system
