Pseudomonas bijieensis: GN234_27830
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Entry
GN234_27830 CDS
T07266
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pbz
Pseudomonas bijieensis
Pathway
pbz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GN234_27830 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbz03400
]
GN234_27830 (uvrB)
DNA repair and recombination proteins [BR:
pbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GN234_27830 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GN234_27830 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Motif
Other DBs
NCBI-ProteinID:
QKS85508
UniProt:
A0A6N1CKY4
LinkDB
All DBs
Position
6296033..6298048
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEITKRVAVEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDE
IGKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctagtcacccgattccagcccgccggcgaccagccggaagccatt
cgcctgatggtcgaaggcatcgaggccgggctggcgcaccagacgctgctcggtgtgacc
ggctcgggcaagaccttcagcattgccaacgtgattgcccaggtgcagcgcccaaccctg
gtactggcgccgaacaagaccctggccgcgcagctatacggtgagttcaaggcgtttttt
ccgaataacgccgtggagtacttcgtttcctactacgactactaccagcccgaggcctac
gtgccgtcgtcggacaccttcatcgagaaggatgcctcgatcaacgaccacatcgaacag
atgcgcctgtcggcgaccaaggccttgctcgagcgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggtctgggcagcccggaaacctacctgaagatggtgctgcacgtg
gaccgcggcgacaaactcgaccagcgcgccttgctcaggcgcctggcggacttgcaatac
acccgcaacgacatggattttgcccgggcgacgttccgggtgcgcggcgatgtgatcgac
atctacccggcggaatcggacctcgaagcgatccgcatcgagctgttcgacgatgaagtg
gagagcatttccgcgttcgacccgctgaccggcgaagtcatccgcaagctgccgcgtttc
accttctaccccaagagccactatgtaacgccgcgggaaaccctgctggacgccatcgag
gggatcaaggtcgagctgcaggagcgcctggaatacctgcggtcgaacaacaagctggta
gaagcccagcgtcttgagcagcggacccgctttgacctggagatgatcctggagctgggc
tactgcaacggtatcgaaaactactcgcgctacctgtcgggtcgtccggcgggcgcgcca
ccgccgaccttgtatgactacctgccggccgatgccttgctggtgatcgacgaatcccac
gtcagcgtgccccaggtcggcgccatgtacaaaggcgaccgttcgcgcaaggaaaccctg
gtggaatacggtttccgcctgccctcggccctggacaaccggccgatgcgcttcgacgaa
tgggaaggcgtgagcccgcagacgatttttgtctcggccacccccggcaactacgaggcc
gagcacgccggtcgtgtggtcgagcaagtggtacgaccgaccgggttggtggacccgcaa
gtcgaggtgcgtccggcgttgacccaggtcgacgacctgctctcggaaatcaccaagcgt
gtggcggtggaggagcgggtgctggtcaccacgctgaccaagcgcatggccgaagacctg
accgattacctggccgaccatggcgtgcgggtgcgctacctgcactcggacatcgatacg
gtggagcgggtcgagatcatccgcgacctgcgcctgggcactttcgacgtgctggtgggc
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcgttggtggcgattctcgac
gctgacaaggaaggcttcctgcgttcggagcgttcgttgatccagaccatcggtcgcgcg
gcgcgtaacctcaacggccgggcgattctgtatgccgaccgcatcaccggctccatggaa
cgggccatcggcgagaccgagcgccggcgcgacaagcagatcgccttcaacctggccaat
ggcatcacccccaagggcgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
ccaggctcgcgcagcaaaaagcgcaagggcatggccaaggcggccgaagagagcgcccgc
tacgaggccgaactgcgctcaccgagcgaaatcaccaagcggatccggcagttggaagag
aagatgtaccaactggcccgggacctggagttcgaagccgcggcgcagttgcgcgacgag
attggcaagttgcgcgagcggttgctgactgtctga
DBGET
integrated database retrieval system
