Syntrophotalea carbinolica: Pcar_0005
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Entry
Pcar_0005 CDS
T00285
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pca03032
]
Pcar_0005 (gyrA)
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_0005 (gyrA)
Enzymes [BR:
pca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pcar_0005 (gyrA)
DNA replication proteins [BR:
pca03032
]
Prokaryotic type
DNA Topoisomerases
Pcar_0005 (gyrA)
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pcar_0005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
ABA87268
UniProt:
Q3A8M4
LinkDB
All DBs
Position
6419..8926
Genome browser
AA seq
835 aa
AA seq
DB search
MLTEQNKKTVNIEDELRKSYMDYAMSVIIGRALPDVRDGLKPVHRRVLYAMHELGNAYNK
PYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQDFAMRYPLVDGQGNFGSLDGDSAAAMR
YTEVRMDKLAHELLADLEKETVDFGPNYDDSLQEPLVLPCKFPNLLVNGSEGIAVGMATK
IPPHNLGEVIDGLVAIIDDPTLDDEDLFRLIPGPDFPTAGFILGREGIRKAYETGRGIVQ
MRARALVEKDRRTSREKIVVTEIPYQVNKARLIEKIAELVKSRKIEGISDLRDESDREGI
RVVVELKKDVIPEVILNQLYKMTAMQSSFGIIMLAIVNGQPRVLSLRAVLEHFIEHRKEI
VTRRCIFELRKAEEKAHILEGFKIALENLDEVIAIIKQSANPREAKQRLMERFALSEIQA
QAILDMRLHRLTGMERDKIMAEYREILALINRLKEILASEVEILKIIKSELSEIREKFAD
PRRTEIVDHRGDLSLEDLIVDEDMVVTVSHSGYIKRNAVSLYRSQRRGGKGVTGMRPKEE
DFVEQLFIASTHSFVLVFTDAGKVYWLKVHEIPQGGRASRGKAIVNLLQLQSGENVTSIL
PVREFTEGRYIIFATQNGIVKKTDLMAYANPRSGGIIALTIDEGDRLVSTRLSDGEMDVL
LASQNGKAIRFPEKDARAMGRTSRGVRGMALEGDDQVIGMEVVSDTTAATLVTVTEHGYG
KRTNLDEYRQQGRGGKGIITIKTSERNGKVVDIKLINDDFDLMFITDGGKVLRTRVADLS
VIGRNTQGVRLMVLEPGERIVAVAKLAEKEEDNGTAEAEEAALEGGTGEGAQDVE
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgctaacggaacaaaacaaaaaaaccgtcaacatagaggacgagctgcgcaaatcctat
atggattacgccatgagcgtcattataggccgggctctgccggatgtgcgggacggtctg
aaaccggttcatcgacgcgtgttgtatgccatgcacgaactgggcaatgcttacaacaag
ccttataagaaatcggcgcgtgttgtcggcgatgtaatcggtaagtatcatccccatggc
gattcggctgtctacgataccatcgtacgtttggcacaggattttgccatgcgttatccg
ctggtcgatggccagggtaacttcggctcgcttgacggcgacagtgctgcggccatgcgt
tataccgaagtgcgtatggacaagctggcccatgagttgttggccgatctggaaaaagaa
acggtcgactttggccccaactatgacgattcgttgcaggaaccgctggttttaccctgt
aaatttcctaatttgctggtcaacggttccgaaggtatcgctgtcggcatggcgaccaag
attccgccgcacaatctgggagaggtcatcgatgggctggttgccattatcgatgatccg
acgctcgacgacgaggatctgttccgcttgattcccggtccggattttcctacggccggt
tttatcctcggtcgcgaaggcatccgcaaggcttatgaaaccggccgcgggattgtacag
atgcgggcgcgggcgttggtggaaaaggaccgtcgcaccagtcgggagaaaatcgttgtc
actgaaattccctatcaggtcaacaaggcgcggctcatagaaaaaatcgccgagttggtc
aagtcccgtaaaatcgagggcatatcggacttgcgcgatgaatccgatcgcgagggtatc
cgcgttgtcgtcgagctgaagaaggatgttataccggaagtcatcctcaatcagctttac
aagatgaccgccatgcagtcgtcttttggcatcatcatgctggcgatcgtcaacggtcag
ccgcgggttctgagcctgcgggcggtgttggagcatttcatcgaacaccgcaaagagatt
gtcacacggcgctgtattttcgaattgcgtaaagccgaggaaaaagcccatatcctcgag
ggatttaaaatcgccctggaaaatctcgatgaggtgattgcaattatcaagcaatcggcc
aatcctcgggaagccaaacaacgtctgatggagcgctttgccctatcggaaatccaggcc
caggcgattctcgatatgcgtttgcatcgcctgaccgggatggaacgggataagatcatg
gccgaatacagggaaatactggccttgatcaaccgcctcaaggagatactggccagcgaa
gtggaaatccttaaaataatcaagtcggaattgtcggaaattcgggaaaaattcgctgat
ccccgccgtacggaaatagtggatcatcgcggtgatctttccctcgaagacctgattgtc
gacgaggatatggtcgttaccgtatcccattccggatatatcaagcgtaatgccgtgtcg
ctgtatcgttcccagcgccgcggtggtaaaggcgtgaccggcatgcggcccaaggaagag
gattttgtcgaacagttattcatcgcttcgacccattcgttcgtgctggtgtttaccgat
gccggcaaggtgtattggctcaaagtgcatgaaattccgcagggcggacgggcgtcgcgc
ggcaaggctatcgtcaatctgttgcagttgcaaagtggcgaaaacgtgaccagcattctg
ccggtcagggaattcaccgaaggccgctacattatctttgccacccaaaacggcatcgtc
aaaaagaccgacctcatggcctatgccaacccccggtccggcggtatcatcgctcttacc
attgatgaaggcgatcgcctggtttcgaccagactgtccgatggcgagatggatgtgctg
ttggccagccagaacggcaaagccattcgtttccccgaaaaagacgcgcgcgccatgggc
cgtacgtcgcgcggggtgcgcggtatggcgttggaaggggacgatcaggttatcggaatg
gaggttgtttccgataccacggccgctaccctggtgaccgtgacggaacatggctacggc
aagcgcaccaatctggatgaatatcgccaacaaggccgcggtggcaagggaattatcacc
atcaaaacttccgagcgtaacggtaaggttgtcgatatcaagctcataaatgacgacttc
gatctgatgtttatcaccgatggcggtaaagtcctgcgaacccgcgtggccgatctgtcg
gttatcgggcgcaatacgcaaggggtccggctgatggttctggaaccgggagagcgtatt
gtcgccgttgccaaacttgccgaaaaagaagaggataatggaactgcagaggctgaagaa
gcagctcttgaaggaggaacgggcgagggcgcgcaagacgtcgaataa
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