Syntrophotalea carbinolica: Pcar_0038
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Entry
Pcar_0038 CDS
T00285
Name
(GenBank) ABC transporter, ATP-binding/membrane protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pca
Syntrophotalea carbinolica
Pathway
pca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pcar_0038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0038
Transporters [BR:
pca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pcar_0038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
AAA_22
AAA_18
T2SSE
Adeno_IVa2
AAA_23
AAA_16
AAA_21
HUTI_composite_bact
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABA87301
UniProt:
Q3A8J1
LinkDB
All DBs
Position
41413..43143
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AA seq
576 aa
AA seq
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MRRLRFLLPYFKPYRSILLAGLLWLLVTDVLGLLGPWLLKVGIDAVQQHRAQTLYGAGLL
LAVMALLRYATRSRSRHCFLHTACRLENDLRQHLLARLLQQGGSFFDRYRTGDLLSRFTN
DIGNLRTLAGFGLMIFVNTLMVYGMTLVVLLGMSPVLTLVALLPYPLLFLLTRYLSSRLL
AASAKVQRGLGQVSETLEEGIGGHAVIRSYGLRSLRGAYFDTLNERYLHASLVLARLRNA
IGPSMALIAPLGTLLVLYFGGRRVIDQQLSLGELVAFNAYLVQLTMPTLMLGWILGLVQR
GAASAERLADILQLQQPPKGLPIAQRQGPPAVCFRNLTFGYVDKPVLRDLQLEVAPGSLI
GVAGPTGSGKSTLLRLLAGLYVPEPEQLFIDGRDLTQLDGGAYRQRVAMVPQEGRLFSGS
LRDNLLYAVPDADDNLLQKVVEAVCLQDDIAGFAQGFDTRVGEGGQALSGGQRQRVCLGR
ALARDAGLWLLDDPFSHLDAATAQSVWRQLRRWLVGKTVFLASGQASLLAGADRIVVLDA
GRLVESGTYDALRAQKGVYARLLEKERLQRELEGLS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgattgcgctttttactgccttatttcaaaccgtaccggtcgattcttctggcc
ggattgctgtggctgctggtgaccgatgtgttgggccttttggggccctggctgcttaag
gtcgggatcgatgccgtacagcagcaccgtgcgcagactctgtacggtgccggactgctg
ctggcggtcatggcgttgctgcgctatgccacccgcagtcgatcccgccattgttttctg
cacaccgcctgccgcctggaaaacgatttgcgtcagcatctactggctcgcctgctccag
cagggcgggtcttttttcgaccgttatcgcaccggggatttgttgtcccggttcaccaac
gatataggcaatctgcgtactctggccggtttcgggctgatgatctttgtcaatacgttg
atggtgtatggcatgaccctggttgttttactgggcatgtcgccggttctgaccctggtt
gcgttgttgccctatcccctgctgtttttgctgacccgctatctgtccagtcgcctgctg
gcagcttcagccaaggttcaacgaggcctgggccaggtcagcgagacgctggaggagggc
atcggcggtcacgccgtgattcgcagttatggcctgcggagcttgcgcggcgcatatttc
gacaccctcaacgaacgttatctgcacgccagcctggttttggcccggttgcgcaatgcc
atcggtcccagcatggcgcttatcgcaccgctgggcactttgttggtcttgtacttcggc
ggccgcagggtcatcgatcaacagctgtccctgggagaactggtggcgtttaatgcctat
ctggtgcaactgaccatgccgacgctgatgctcggctggatactggggttggtccagcgc
ggtgccgccagcgccgagcgtctggcggatattctgcagttgcagcagccgcccaaaggg
ctgcctattgcgcagcggcaaggtccgccagcggtgtgctttcgcaacctgaccttcggt
tatgtcgacaagccggtattacgggatttgcagctggaggtggcgcccggcagtctgatc
ggtgtggccggcccgacaggttccggtaaaagtaccctgctgcgattgctggccgggctc
tatgttcctgagccggaacagttgttcatagatggtcgggatctgacccaactggatggc
ggggcataccggcagcgggtcgccatggtgccccaggagggtcgattgttctccggctcg
ctgcgggataatttgctgtacgccgtgcccgatgccgatgacaatctgttgcaaaaggtg
gtcgaggccgtctgcctgcaggatgacatcgcgggttttgcgcaaggatttgacacccgt
gtcggggaaggcggccaggcactgtccggggggcagcgccagcgggtttgcctcggccgg
gctctggccagggatgccggtctgtggttgctggatgatcctttcagccatcttgatgcc
gccacggcgcaatccgtatggcggcagcttcggcgatggctggtcgggaaaaccgttttt
ctggcctcgggacaggcctctttgctggcgggggcggatcgcatcgtggtgctggatgcc
ggacgattggtggaatccgggacctatgatgccttgcgtgcgcaaaaaggggtgtacgcc
cggttgttggaaaaagaacgactacagcgtgaactggagggcttgtcgtga
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