Syntrophotalea carbinolica: Pcar_0046
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Entry
Pcar_0046 CDS
T00285
Name
(GenBank) autotransporter domain outer membrane protein and cysteine peptidase
Organism
pca
Syntrophotalea carbinolica
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Motif
Pfam:
Autotransporter
Peptidase_C1
VacA_C
Peptidase_C1_2
Motif
Other DBs
NCBI-ProteinID:
ABA87309
UniProt:
Q3A8I3
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Position
complement(53028..56228)
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AA seq
1066 aa
AA seq
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MRFIPLLCLLLAFVFCNYAGGADLPSSFDLRNIDGRSYIGPVRNQKKCGSCWSFGTLAAA
ESTWNRVHGLYDDQAIDFSEAFLTWSLSPLYDGLHGCDGGSLDLQQNTALIEYGVPLESD
FPYTMTDPGSDLHWDATRYSFLDWYRIPPSDIETTRRILYHIGAVTAGVLVEDDFYAYSG
GILTNQNTAINNPLPYESSANHLVALVGWNDEPGDDGLGYWILRNSWSENWGDNGYVNIR
YTTAKVALHSAYMMLEPWSGANVVLENQEDLSATPWSAGGTLNAHGLDLWGGAASSVTNR
GTILAEAYAETELATARGVYLWGGPEGQVINEKLIGALASSDNNQASAYAICLQGGLVDN
SGQLLALATSHADQALAFGVWAANGGNPLEIRNNGLVLAWAQNSGTNAGYGIWADSRYLT
EVTNSGSIFAFADTYAVGVLLSGGPAVLNNSGTILAAASLEDPDILSGTSIGLLATKKTT
ILNSGTISGAYASIKSEDDTLLVLETGSDLIGTAYLKGNSDVVWLNGSGSEDTSFYGVET
LLMAGDDWSLSGASAFGSIEVALGRLGVDGALAGETSVLAEGILGGNGSVTGTVANGGTV
APGHSVGHLTVVGDYAQTADGTLEIEIGDGIADLLTVTGTADLAGTLLILPDGYATGGSY
TFLEAGTIAGAFETLTSAAVLSVTLDDATPGSLSLDVTRNSYTALSSPHNRGLASTLDGL
RSTADGDFGSLLDSLDLALSQSALNDALASLTPRIHGLASTVILNDAQTRLGDLRRRLQR
VDPDMQPEGKPSAWFEILGEDNRYGSDGGYFGAREELYGLLLGMHRSTSGGLTLGVAAAV
SESRLDGRDGNDDSEIKSQQGYLYAAWREPRRADGMHMEAVVGGGLCQLDTDRSIPFAGR
RPHSEHDGSLIGATFNGGYTLDVNGWIIDPGAGLSFVHLREESFRESGANSADLKIAARD
NDSLQSQLGVRLSHPLRLDTLTLQPELRIEWQHEFNRKTEALQARLAGGDTFITPGRDLA
GDGLLLGASLRARMSDNVFGMLDYTCDLQSHGAAGHALRLHLAVMF
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcattcccctgctctgccttcttctagcttttgtgttctgcaattacgccggt
ggcgcggacctgccctcctcctttgacctgcgcaacatcgacggacgcagctatattggg
ccggtgcgcaaccagaaaaagtgtggcagttgctggtccttcggcaccctggccgccgcc
gaaagcacctggaaccgggtccatggcctgtatgacgaccaggccatcgacttttccgaa
gcctttttgacctggagcctgagtcctctgtacgatggcctgcatgggtgcgatggcggc
agtctggatctccagcaaaacacggcactgatcgagtatggcgtaccacttgaatcggac
tttccctacaccatgacagatccaggcagcgatctgcactgggatgcaacgcgctatagt
tttctggactggtaccgcattccccccagcgacatcgaaaccacgcgccgcattctctac
cacattggagcggttaccgccggcgtactggtcgaagatgacttttacgcctactccggc
ggcatcttgaccaaccaaaacaccgccatcaacaatcccttgccttacgaatcctccgcc
aaccaccttgttgccctggtgggctggaacgatgaacccggggacgacggtctaggctat
tggattttacgtaacagctggtctgaaaactggggggataacggctatgtaaacatccgc
tataccaccgccaaagtggcgctgcacagcgcctatatgatgttggaaccctggagcggt
gcgaatgtcgtcctggaaaatcaagaagacctgtcggctactccctggagtgccggcggt
acacttaacgctcacggcttggacctgtggggcggcgccgccagtagcgtaaccaaccgg
ggaaccatcctggccgaagcatacgctgaaaccgaactggccacggcgcgcggcgtctat
ctgtggggtggacccgaaggccaggtgattaacgagaagcttataggagctttggcctcc
agcgacaacaaccaggccagcgcctatgccatctgcctgcagggcggtcttgtggataat
agcggccaactgctcgccctggccacaagccatgccgaccaggcactggccttcggcgta
tgggcggccaacggtggcaatcccctggaaatccgcaacaacggactggtgctggcatgg
gctcaaaacagcggcaccaatgccggctacggcatctgggccgacagtcgctacctgacc
gaagtcaccaacagcggcagtatcttcgcctttgccgacacttacgctgtcggtgtgctg
ttgagcggaggtcctgctgtactgaacaacagcggcaccatcctggcggcagcgtccctg
gaagatccggacatattatccggcaccagtatcggcctgctggctaccaagaaaacaacg
attctcaacagcggcaccatcagcggcgcttatgcctccataaaatccgaggacgacacc
ttactcgtgctggaaaccggatccgatctgatcggaacggcctatctcaaaggaaacagc
gatgtcgtttggctaaacggcagcggcagtgaagatacgtccttttacggtgtggaaacc
ctgctgatggccggcgacgactggtccctgagcggcgcctcagccttcggcagcatcgag
gtcgccctggggcggctgggggtggacggcgcattggcgggtgagacatcggtcctggca
gagggcatcctcggcggcaacggttcggtaaccggcacggtcgccaacggcggcacggtc
gcgccgggccattccgtcggccatctcaccgttgtcggcgactacgcgcagaccgccgat
ggcaccctggagatcgaaatcggcgacggcatcgccgacctgcttaccgtcaccggcacc
gccgatctggccggcaccctgctgatactgcccgacggctacgccaccggcggcagctat
accttcctggaggcgggaaccatcgccggcgccttcgaaacactgaccagcgccgcggtg
ctctctgtcaccctggacgatgccacccccggcagcctgagcctcgatgtgacgcgcaac
agctacacagcactgtcctcgccgcacaaccggggtctggccagcaccctggacggtctg
cggtccaccgccgacggcgatttcggttccttgctcgacagcctcgatctggccctgagt
cagtcggcgctcaacgacgccctcgcctctctgaccccgcgcatccacggtctggccagc
accgtgatcctgaacgatgcgcaaacccgcctgggcgatctgcgccgccgcctgcagcgc
gtcgatccggacatgcagccggaaggaaagccctccgcctggttcgagatcctcggtgaa
gacaaccgctacggcagcgatggcgggtatttcggcgcacgggaagaactttacggactg
ctgctggggatgcaccgatcaacctccggtggcctgaccctgggcgtggcggccgccgtg
tcggaaagccgcctggacggccgggacggcaacgacgacagcgaaatcaaaagccagcag
ggatacctttacgcggcctggcgcgagccgcgccgcgccgacggcatgcatatggaggcc
gttgtgggcggtggtctctgtcagctggacaccgatcgctccatcccgttcgccggccgc
agaccccacagcgagcatgacggcagcctgatcggcgccaccttcaacggcggctatacg
ctagacgttaacggatggatcatcgatcccggcgccgggctgagcttcgtgcatctgcgc
gaagagagctttcgcgaatccggcgccaacagcgccgacctgaagatcgcggcgcgcgac
aacgattccctgcaaagccagctgggtgtgcgtttaagccatccgttgcggctcgacacc
ctgaccctgcaaccggaactgcgtatcgaatggcagcacgaattcaatcgcaagaccgaa
gcgctgcaggcccgcctggccggcggcgacacgtttatcacaccgggccgcgacctggcc
ggcgacggcctgctgctcggcgcctcgctgcgggcccggatgtccgacaacgtcttcgga
atgctggactacacctgcgacctgcagagccacggcgccgcaggtcacgccctgcgtctg
cacctggcagtgatgttctga
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