Syntrophotalea carbinolica: Pcar_0071
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Entry
Pcar_0071 CDS
T00285
Name
(GenBank) helix-turn-helix transcriptional regulator, LysR family
Organism
pca
Syntrophotalea carbinolica
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
DUF4180
HTH_20
MarR
Motif
Other DBs
NCBI-ProteinID:
ABA87334
UniProt:
Q3A8F8
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Position
86795..87673
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AA seq
292 aa
AA seq
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MDDMDSNALKIFLAVAEEGSVSRAAERLHCVQSNVTTRIRKLEADLGAELFHRTRKGMGL
SAAGHLLLPYARSVTHLLHEARAALDPSSAPCGPLRLGAMDTAAVVHLPALLAGYHREYP
DVDLQLSTGASGEMVQRVLDYSLEGAFVGGRVEHPDIVAEEVLCEELVMVTSSTEPVVDE
ESVLSVLVYRRGCSCRRKLEEWLKHTRRTPSRVVEMGALDAILGCVGAGMGITMLPRSFV
TREPFRSLVHIHAVAPPFDRLPIQLIRRRDVQPSSAMHSFLGMARETLAAKS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatggattccaacgcgttgaaaatttttttggcggttgccgaggaggggagt
gtctccagggccgccgagcgtttgcactgcgtgcagtcgaatgtcaccacgcgtattcgt
aaacttgaagcggatttgggggcagagctgtttcaccgcacgcgcaaggggatggggctc
tctgccgccggtcatcttctgttgccctacgcacgctccgtcacacatctgctgcatgaa
gcgcgggcggccctcgacccttccagcgcgccgtgtgggcctttgcgcctcggtgccatg
gatacggcggccgtggtgcaccttccggcgttactggcgggttatcaccgggaatatccg
gacgtcgatctgcaattgagcaccggcgccagcggcgaaatggtccagcgggtgctcgat
tactcgttggagggcgcttttgtcggtggccgcgtagagcatcctgacattgtagcagaa
gaagtgctgtgcgaagagctggtcatggtgaccagtagtaccgaacctgtcgtggatgag
gagtcggtattgtcggtactggtctatcgcagaggctgttcctgtcgccgcaagctcgaa
gaatggcttaaacacacgaggcgtacgccttcccgggtggtggaaatgggagccctcgat
gccatcctcggttgcgtcggcgccggcatggggatcaccatgctgccccgcagtttcgta
acgcgcgaacctttccgctctctggtgcatattcatgccgtagcgccgcccttcgatcgc
ctgccgattcaactgattcgccgtcgcgatgtgcagccttcgtcggccatgcattctttt
ctcgggatggcgcgcgaaactctggctgccaaatcttga
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