Syntrophotalea carbinolica: Pcar_0099
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Entry
Pcar_0099 CDS
T00285
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pcar_0099 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_0099 (uvrB)
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pcar_0099 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pcar_0099 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
TrwB_AAD_bind
DUF87
SWI2_SNF2
AAA_16
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ABA87362
UniProt:
Q3A8D0
LinkDB
All DBs
Position
complement(118811..120814)
Genome browser
AA seq
667 aa
AA seq
DB search
MAKFNLKSNYQPRGDQPQAIEELSTGLQRGDKHQVLLGVTGSGKTFTMANVVAQVQRPTL
VLAHNKTLAAQLYGEFKELFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSINEEIDK
MRHSATRSLLSRNDVLIVSSVSCIYGLGSPEAYYGMLIRLETGMQLDRNALLKNLVEIQY
DRNDVDFHRGTFRVRGDTVEIFPAYEEKRALRIEFFGDEIDAICEIDPLRGKVLDRLERT
AVFPASHYVATRPTLDRAIREIQDELRERLTWFRENNMLLEAQRIEQRTMFDIEMIEEMG
YCQGIENYSRFLDGRQAGQPPATLFDYFPDDALLFIDESHVTVSQIGAMYRGDRSRKETL
VRYGFRMPSALDNRPLTFEEFEAKGIQTIYVSATPADYELRKADGVVVEQIIRPTGLLDP
PIDVRPAKDQVDDLIHEIRLTIKQNERVLVTTLTKRMAEELTGYLGELGIKVRYLHSDID
TVERMQILRELREGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTCGR
AARNVAGRVIMYADRITRSMRACLDETERRRTAQLAYNEEHGITPQTVKKSLRSILEDIA
EKDYVELPQVAEELGDYHTPQDVKNEIARVKEEMLAAAANLEFEKAAELRDRMLELDKLE
LSIRNVK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattcaatcttaaatcgaattaccagccgcggggcgatcagccacaggccatc
gaagaactgtcgaccggattgcagcgtggcgacaaacaccaggtgttgctcggcgtcacc
ggttcgggcaagaccttcaccatggcaaacgtcgtggcacaggtgcaacgccccaccctg
gtcctcgcccacaacaaaaccctggcggcacagctgtacggcgagttcaaggagctgttt
ccggacaatgccgtcgagtacttcgtctcctactacgactactaccagcccgaagcctac
gtaccgaccaccgacaccttcatcgaaaaagattcctccatcaatgaagagatcgacaag
atgcgccacagcgccacgcgcagcctgctcagccgcaacgacgtgctgatcgtctcgtcg
gtatcctgcatctacggtctcggttcccctgaagcttattacggcatgcttatccgcctg
gaaactggcatgcagcttgaccgcaatgccttactcaaaaacctggtggagattcagtac
gatcgcaacgatgtcgactttcaccgcggtactttccgggtgcgtggcgacacggtggaa
atcttcccggcctacgaagaaaaacgcgccctgcgcatcgagtttttcggcgacgaaatc
gatgccatttgcgaaatcgatccgctgcgcggcaaagtactcgaccgtttggagcgcact
gcagtctttcccgccagtcattacgtggccacccgcccaaccctcgatcgcgctattcgc
gagatccaggacgagttgcgtgaacgtctcacctggttccgggaaaacaacatgctgctg
gaggcgcaacgcattgagcaacggaccatgttcgacatcgaaatgatcgaagagatgggc
tactgccagggaatagagaactattcacggttcctggacggacgccaggccggccagccg
cccgccaccctgttcgactacttccccgacgatgcacttctgttcatcgacgagtcccac
gtcaccgtctcgcagatcggtgccatgtaccgaggcgaccgctcgcgcaaagagaccctg
gtacgctacggctttcgcatgccgtcagccctcgataaccgtcccttgacctttgaggaa
ttcgaagccaagggcattcagaccatctatgtctcggcaaccccggccgactacgaattg
cgcaaggccgatggcgtggtggtcgagcagatcattcgccccaccgggctgctcgacccg
cccatcgatgtaagaccggccaaagatcaggtcgacgaccttattcacgaaatacgcctc
accatcaaacagaacgaaagagtcctggtcaccacccttaccaagcgcatggccgaggaa
ctcaccggctaccttggtgaactcggcataaaggtgcggtatctgcactccgatatcgat
accgtggaacgtatgcagatcctgcgcgagctgcgcgaggggctgttcgatgtgctggtt
ggcatcaacctgctgcgcgaggggctcgatatccccgaggtatcgctggtcgccattctg
gatgcggataaagagggctttttacgctccgaacggtcgctgatccagacttgcgggcgc
gccgcgcggaatgtcgccggccgggtcatcatgtacgccgaccggatcacccgctccatg
cgcgcctgcctcgatgaaaccgaacgacgccgcacagcccagttggcttacaacgaagag
cacggcatcactccgcagaccgtcaagaaatcactgcgctcgatcctcgaagatatagcc
gaaaaggactatgtggaactgccgcaggtcgccgaagagcttggcgactatcacacacct
caggatgtcaaaaacgaaatcgcccgggttaaggaggaaatgctggctgcggcggccaat
ctggagtttgaaaaagctgcggagctgcgcgaccgcatgctggagttggataaactggag
ctgtccatccgaaacgtaaagtag
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integrated database retrieval system
